RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CTSKP43235 329 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 ITKQ08881 620 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 SLC10A7Q0GE19 358 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 CAMK1DQ8IU85 385 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 PCDH19Q8TAB3 1148 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 HCAR2Q8TDS4 363 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 CXorf40AQ8TE69 158 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 RAPGEF5Q92565 580 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF830Q96NB3 372 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 HAUS2Q9NVX0 235 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 DDX56Q9NY93 547 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 IMPACTQ9P2X3 320 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 ZFR2Q9UPR6 939 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 FNDC3AQ9Y2H6 1198 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 A0A1W2PR77 199 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 MED19A0JLT2 244 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 IGLON5A6NGN9 336 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 H0Y8X5 98 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 SH3BP5O60239 455 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 MAFKO60675 156 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 KRT1P04264 644 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 CD59P13987 128 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 TIMP2P16035 220 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 COMTP21964 271 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 HSPA9P38646 679 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 CCT8P50990 548 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 SUOXP51687 545 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 POLR2LP62875 67 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 ELP6Q0PNE2 266 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 OVGP1Q12889 678 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 HNRNPDQ14103 355 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 PAFAH1B3Q15102 231 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 TCEAL1Q15170 157 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 LRRC73Q5JTD7 316 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 PRAMEF14Q5SWL7 426 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 NCBP2-AS2Q69YL0 99 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 TIGD7Q6NT04 549 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 ERAP2Q6P179 960 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 BRAT1Q6PJG6 821 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 IQCHQ86VS3 1027 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 CCNYQ8ND76 341 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 BAG1Q99933 345 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 FZD3Q9NPG1 666 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 SCUBE2Q9NQ36 999 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 CA5BQ9Y2D0 317 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 HYOU1Q9Y4L1 999 aa18.27■□□□□ 0.52
PDLIM2-215ENST00000456545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 C10orf142B7Z368 130 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 GIPC1O14908 333 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 MFSD11O43934 449 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 BUB1BO60566 1050 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 GJB3O75712 270 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 THEGLP0DJG4 465 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 MX2P20592 715 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 MMP13P45452 471 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 RGRP47804 291 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 ARRB1P49407 418 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 AP1S1P61966 158 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 IL9RQ01113 521 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 IFI16Q16666 785 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 ZNF423Q2M1K9 1284 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 TMEM259Q4ZIN3 620 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 LRRC38Q5VT99 294 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 RFX6Q8HWS3 928 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 NAXDQ8IW45 347 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 OXR1Q8N573 874 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 RHBDD1Q8TEB9 315 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 RNF25Q96BH1 459 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 RNF157Q96PX1 679 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 ELF4Q99607 663 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 C1QTNF7Q9BXJ2 289 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 ITM2BQ9Y287 266 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 PCDHGB2Q9Y5G2 931 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 DOCK9Q9BZ29 2069 aa18.26■□□□□ 0.51
PDLIM2-215ENST00000456545 TRPM6Q9BX84 2022 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 ASCC3Q8N3C0 2202 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 CACNA1EQ15878 2313 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 SHROOM3Q8TF72 1996 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 FPGTO14772 594 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 MMP20O60882 483 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 TM7SF2O76062 418 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 MAP3K6O95382 1288 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 ITGAVP06756 1048 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 CDC25BP30305 580 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 CLDN2P57739 230 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 NXPH1P58417 271 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 FAM193AP78312 1265 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 UGP2Q16851 508 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 PIP4P1Q86T03 277 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 KIAA1328Q86T90 577 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 FAM174AQ8TBP5 190 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 PDCD6IPQ8WUM4 868 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 CAMK1GQ96NX5 476 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 WRAP53Q9BUR4 548 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 NT5MQ9NPB1 228 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 GGT7Q9UJ14 662 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms