RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 SUV39H2Q9H5I1 410 aa25.15■■□□□ 1.62
MSH2-203ENST00000454849 TPX2Q9ULW0 747 aaKnown RBP25.15■■□□□ 1.62
MSH2-203ENST00000454849 TRPM6Q9BX84 2022 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 UPK3BL1B0FP48 263 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 UPK3BL2E5RIL1 263 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 PEX11BO96011 259 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 AKT2P31751 481 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 TMCO4Q5TGY1 634 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 NCBP2-AS2Q69YL0 99 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 ZSWIM9Q86XI8 627 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 PGBD5Q8N414 524 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 GOLPH3Q9H4A6 298 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 GDF3Q9NR23 364 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 RCOR3Q9P2K3 495 aaPredicted RBP25.14■■□□□ 1.62
MSH2-203ENST00000454849 PCDHA13Q9Y5I0 950 aa25.14■■□□□ 1.62
MSH2-203ENST00000454849 LRRD1A4D1F6 860 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 AP1G1O43747 822 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 MTA2O94776 668 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 TOP3BO95985 862 aaKnown RBP25.13■■□□□ 1.61
MSH2-203ENST00000454849 HNRNPA2B1P22626 353 aaKnown RBP25.13■■□□□ 1.61
MSH2-203ENST00000454849 XPAP23025 273 aaPredicted RBP25.13■■□□□ 1.61
MSH2-203ENST00000454849 KDELR1P24390 212 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 NUDT1P36639 197 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 SGCGQ13326 291 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 PDK2Q15119 407 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 SHBQ15464 509 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 FAM182AQ5T1J6 154 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.13■■□□□ 1.61
MSH2-203ENST00000454849 PQLC3Q8N755 202 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 PAF1Q8N7H5 531 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 SPC24Q8NBT2 197 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 TMEM145Q8NBT3 493 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 RAB7BQ96AH8 199 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 KLHDC7BQ96G42 594 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 ELF4Q99607 663 aaPredicted RBP25.13■■□□□ 1.61
MSH2-203ENST00000454849 SEPT3Q9UH03 358 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 INTUQ9ULD6 942 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 PCDHB9Q9Y5E1 797 aa25.13■■□□□ 1.61
MSH2-203ENST00000454849 AREL1O15033 823 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 TSPAN6O43657 245 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 ZNF883P0CG24 379 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 THEGLP0DJG4 465 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 COMTP21964 271 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 SERPINB6P35237 376 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 ARHGAP25P42331 645 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 CCT8P50990 548 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 MAXP61244 160 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 ZNF235Q14590 738 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 RFTN1Q14699 578 aaPredicted RBP25.12■■□□□ 1.61
MSH2-203ENST00000454849 CFAP58Q5T655 872 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 KIAA1161Q6NSJ0 714 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 GCNT7Q6ZNI0 430 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 MAP7D3Q8IWC1 876 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 OR13H1Q8NG92 308 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 RHBDD1Q8TEB9 315 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 PANX2Q96RD6 677 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 PCDH12Q9NPG4 1184 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 DKK3Q9UBP4 350 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 LCMT1Q9UIC8 334 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 COQ6Q9Y2Z9 468 aa25.12■■□□□ 1.61
MSH2-203ENST00000454849 A0A1B0GTQ1 180 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 POM121BA6NF01 834 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 SPINK2P20155 84 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 GBE1Q04446 702 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 FOXC1Q12948 553 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 BNIP3Q12983 259 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 LLGL1Q15334 1064 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 SPA17Q15506 151 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 TRIP6Q15654 476 aaKnown RBP25.11■■□□□ 1.61
MSH2-203ENST00000454849 RNF25Q96BH1 459 aaPredicted RBP25.11■■□□□ 1.61
MSH2-203ENST00000454849 PSKH2Q96QS6 385 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 ZNF670Q9BS34 389 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 C1QTNF2Q9BXJ5 285 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 ATP13A3Q9H7F0 1226 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 PCOLCE2Q9UKZ9 415 aa25.11■■□□□ 1.61
MSH2-203ENST00000454849 GOLGA8CPA6NN73 597 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 A8MX80 341 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 KRT1P04264 644 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 CYLC1P35663 651 aaPredicted RBP25.1■■□□□ 1.61
MSH2-203ENST00000454849 CSNK1DP48730 415 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 BCL2L1Q07817 233 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 SLC10A2Q12908 348 aaPredicted RBP25.1■■□□□ 1.61
MSH2-203ENST00000454849 PAFAH1B3Q15102 231 aaKnown RBP25.1■■□□□ 1.61
MSH2-203ENST00000454849 UGP2Q16851 508 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 Q6ZSR6 202 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 PTAR1Q7Z6K3 402 aaPredicted RBP25.1■■□□□ 1.61
MSH2-203ENST00000454849 CCDC170Q8IYT3 715 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 CXorf40AQ8TE69 158 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 BMFQ96LC9 184 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 ZNF641Q96N77 438 aaPredicted RBP25.1■■□□□ 1.61
MSH2-203ENST00000454849 ZNF599Q96NL3 588 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 NOD2Q9HC29 1040 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 NT5MQ9NPB1 228 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 PCDHGC4Q9Y5F7 938 aa25.1■■□□□ 1.61
MSH2-203ENST00000454849 SHROOM3Q8TF72 1996 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 RCCD1A6NED2 376 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 C3orf70A6NLC5 250 aaPredicted RBP25.09■■□□□ 1.61
MSH2-203ENST00000454849 SPOPO43791 374 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 SDC3O75056 442 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 CBFA2T3O75081 653 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms