RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 TBC1D3HP0C7X1 549 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 ITGB7P26010 798 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 CD27P26842 260 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
VPS16-205ENST00000453689 CCR5P51681 352 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 DYNLT1P63172 113 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 IL10RBQ08334 325 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 PUM1Q14671 1186 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS16-205ENST00000453689 MYLK3Q32MK0 819 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 TBC1D3GQ6DHY5 549 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 TBC1D3CQ6IPX1 549 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 NYAP1Q6ZVC0 841 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 ERN2Q76MJ5 926 aaKnown RBP14.85□□□□□ -0.03
VPS16-205ENST00000453689 TBC1D3Q8IZP1 549 aaPredicted RBP14.85□□□□□ -0.03
VPS16-205ENST00000453689 PLD5Q8N7P1 536 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 LRIG1Q96JA1 1093 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 EXOC2Q96KP1 924 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 NAPGQ99747 312 aaPredicted RBP14.85□□□□□ -0.03
VPS16-205ENST00000453689 HDAC8Q9BY41 377 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 EBF2Q9HAK2 575 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 TM9SF3Q9HD45 589 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 TMEM9BQ9NQ34 198 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 IPO11Q9UI26 975 aaKnown RBP14.85□□□□□ -0.03
VPS16-205ENST00000453689 SPTBN4Q9H254 2564 aa14.85□□□□□ -0.03
VPS16-205ENST00000453689 A0A1W2PPC4 97 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 CTAGE9A4FU28 777 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 ARHGAP33O14559 1287 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 INSIG1O15503 277 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 CST8O60676 142 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 UGT2B4P06133 528 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 ADRB3P13945 408 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 TGM2P21980 687 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 NEK3P51956 506 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 ETF1P62495 437 aaKnown RBP14.84□□□□□ -0.03
VPS16-205ENST00000453689 RAD51Q06609 339 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 CCDC15Q0P6D6 951 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 LLGL1Q15334 1064 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 ZNF805Q5CZA5 627 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 AADACL2Q6P093 401 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 BBS12Q6ZW61 710 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 PARS2Q7L3T8 475 aaKnown RBP14.84□□□□□ -0.03
VPS16-205ENST00000453689 RTKNQ9BST9 563 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 HEMGNQ9BXL5 484 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 OSBPL1AQ9BXW6 950 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 PREBQ9HCU5 417 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 SNX12Q9UMY4 172 aa14.84□□□□□ -0.03
VPS16-205ENST00000453689 C4orf47A7E2U8 309 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 LATO43561 262 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 MAFKO60675 156 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 TJP3O95049 919 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 SYPP08247 313 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 MAPK8P45983 427 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 RGRP47804 291 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 NR2C2P49116 596 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 BNC1Q01954 994 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 GBE1Q04446 702 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 ADCY2Q08462 1091 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 GRIK2Q13002 908 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 RFTN1Q14699 578 aaPredicted RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 FBXL19Q6PCT2 694 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 GDPD4Q6W3E5 623 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 TRIM69Q86WT6 500 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 TSEN2Q8NCE0 465 aaKnown RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 PBKQ96KB5 322 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 C16orf45Q96MC5 204 aaPredicted RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 SLC6A18Q96N87 628 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 KLHL32Q96NJ5 620 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 OSBPL9Q96SU4 736 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 HERPUD2Q9BSE4 406 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 CINPQ9BW66 212 aaPredicted RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 GTPBP2Q9BX10 602 aaKnown RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 DTLQ9NZJ0 730 aa14.83□□□□□ -0.04
VPS16-205ENST00000453689 TPX2Q9ULW0 747 aaKnown RBP14.83□□□□□ -0.04
VPS16-205ENST00000453689 C16orf96A6NNT2 1141 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 APOC4-APOC2K7ER74 178 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 TM4SF5O14894 197 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 RNGTTO60942 597 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 PIGNO95427 931 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 PEX11BO96011 259 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 APOC2P02655 101 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 TCP1P17987 556 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 MX2P20592 715 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 MAT2AP31153 395 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 CASQ1P31415 396 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 CXCR5P32302 372 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 ABL2P42684 1182 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 CSNK1EP49674 416 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 AFF3P51826 1226 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 SLC10A7Q0GE19 358 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 GALNT2Q10471 571 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 KLF1Q13351 362 aaPredicted RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 LBRQ14739 615 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 TMCO4Q5TGY1 634 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 CCDC181Q5TID7 509 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 PAPD7Q5XG87 772 aaKnown RBP14.82□□□□□ -0.04
VPS16-205ENST00000453689 NEK5Q6P3R8 708 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 LAYNQ6UX15 382 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 NPNTQ6UXI9 565 aa14.82□□□□□ -0.04
VPS16-205ENST00000453689 SYT10Q6XYQ8 523 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms