RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CWH43Q9H720 699 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TMEM39AQ9NV64 488 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 G3BP2Q9UN86 482 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 APOBEC2Q9Y235 224 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 B2RBV5 119 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TRIM13O60858 407 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 PRMT2P55345 433 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 RAB10P61026 200 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 GNA12Q03113 381 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 FRG1Q14331 258 aaKnown RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 CSHL1Q14406 222 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TSTD2Q5T7W7 516 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 CLEC14AQ86T13 490 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 KLHDC8BQ8IXV7 354 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 CENPLQ8N0S6 344 aaPredicted RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TACO1Q9BSH4 297 aaKnown RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 GATA5Q9BWX5 397 aaPredicted RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 XPR1Q9UBH6 696 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 DEFB103AP81534 67 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 MYLKQ15746 1914 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TMCO4Q5TGY1 634 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 MAVSQ7Z434 540 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 POU5F2Q8N7G0 328 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 PDCD6IPQ8WUM4 868 aaKnown RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 SREK1Q8WXA9 508 aaKnown RBP11.88□□□□□ -0.51
VTA1-203ENST00000452973 ISL2Q96A47 359 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TBATAQ96M53 351 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 SMIM14Q96QK8 99 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 BTBD10Q9BSF8 475 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 MCMBPQ9BTE3 642 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 TAS2R1Q9NYW7 299 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 GREB1Q4ZG55 1949 aa11.88□□□□□ -0.51
VTA1-203ENST00000452973 NEMP1O14524 444 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 ENTPD5O75356 428 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 HMGA1P17096 107 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 CALB2P22676 271 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 KIAA0930Q6ICG6 404 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 LINGO4Q6UY18 593 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 OR13J1Q8NGT2 312 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 C2orf15Q8WU43 125 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 RMDN1Q96DB5 314 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 FNIP2Q9P278 1114 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 STC2O76061 302 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 CXCL10P02778 98 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 GRIA4P48058 902 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 YBEYP58557 167 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 CDK18Q07002 472 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 DLG1Q12959 904 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 BTG3Q14201 252 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 C2CD4AQ8NCU7 369 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 FAM167BQ9BTA0 163 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MUC3BQ9H195 1237 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 CYP4F12Q9HCS2 524 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 ATP13A1Q9HD20 1204 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MARCH4Q9P2E8 410 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 FIS1Q9Y3D6 152 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MIA3Q5JRA6 1907 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MEI4A8MW99 385 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 E9PBE3 544 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 KLHL41O60662 606 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MPSTP25325 297 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 ELF1P32519 619 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 RGRP47804 291 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 IDH3AP50213 366 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 PLK1P53350 603 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 OXCT1P55809 520 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 TWF1Q12792 350 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 LRRC8EQ6NSJ5 796 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 TDRD5Q8NAT2 981 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 DNAJC1Q96KC8 554 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 PRICKLE1Q96MT3 831 aaPredicted RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 OLFM1Q99784 485 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 BEGAINQ9BUH8 593 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 C1QTNF1Q9BXJ1 281 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 AFF4Q9UHB7 1163 aaKnown RBP11.87□□□□□ -0.51
VTA1-203ENST00000452973 YIPF1Q9Y548 306 aa11.87□□□□□ -0.51
VTA1-203ENST00000452973 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 A0A0U1RQS6 177 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms