RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ATP5HO75947 161 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 PRKCGP05129 697 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 HLA-DQB2P05538 268 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 T-ENOLP0DO92 83 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 PAPOLAP51003 745 aaKnown RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 LIMK2P53671 638 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TMPRSS15P98073 1019 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TEAD2Q15562 447 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 LRRC49Q8IUZ0 686 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 GJD3Q8N144 294 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 KIF2BQ8N4N8 673 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 AGAP2Q99490 1192 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TBL1YQ9BQ87 522 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TMEM120AQ9BXJ8 343 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TXNDC16Q9P2K2 825 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 A0A0G2JND7 137 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ZNF197O14709 1029 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ANXA9O76027 345 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MT-CYBP00156 380 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 LAMP2P13473 410 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 YWHAQP27348 245 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 NMBRP28336 390 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ADRA1AP35348 466 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ARFIP2P53365 341 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 PDE1BQ01064 536 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 EFEMP1Q12805 493 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 INSCQ1MX18 579 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MS4A13Q5J8X5 152 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 STRA8Q7Z7C7 330 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 CLNKQ7Z7G1 428 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 UMODL1-AS1Q8N2C9 162 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 LEMD2Q8NC56 503 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 FBXO32Q969P5 355 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MYRFLQ96LU7 910 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ZSWIM3Q96MP5 696 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 COL25A1Q9BXS0 654 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 LRMDAQ9H2I8 198 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ATXN3LQ9H3M9 355 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 SNX15Q9NRS6 342 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
PKP4-206ENST00000452162 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 LIMD1Q9UGP4 676 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 DCDC2Q9UHG0 476 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 ZFP69BQ9UJL9 534 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 CDH7Q9ULB5 785 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 IGLV3-10A0A075B6K4 115 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 DNAJC6O75061 913 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 PEX11BO96011 259 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 F11P03951 625 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 PROCP04070 461 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 KRT16P08779 473 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 RHOQP17081 205 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 TARSP26639 723 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 SPRP35270 261 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 SERPINB8P50452 374 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 GEMP55040 296 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 CSE1LP55060 971 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 CYP4F8P98187 520 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 TRIP4Q15650 581 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 FASTKD1Q53R41 847 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 TAF1BQ53T94 588 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 HSP90AA5PQ58FG0 334 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 PPM1JQ5JR12 505 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MBLAC2Q68D91 279 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 SUGP1Q8IWZ8 645 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 FATE1Q969F0 183 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 TRMT2BQ96GJ1 504 aaKnown RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 PPP1R2P1Q96PQ5 205 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 C20orf96Q9NUD7 363 aaPredicted RBP10.84□□□□□ -0.67
PKP4-206ENST00000452162 HEY2Q9UBP5 337 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 DOCK4Q8N1I0 1966 aa10.84□□□□□ -0.67
PKP4-206ENST00000452162 MYLKQ15746 1914 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 IGLV3-27P01718 113 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 ASGR2P07307 311 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 FGF3P11487 239 aaPredicted RBP10.83□□□□□ -0.68
PKP4-206ENST00000452162 TYK2P29597 1187 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 NDST2P52849 883 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 CDK18Q07002 472 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 TAF10Q12962 218 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 FSTL4Q6MZW2 842 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 CMC1Q7Z7K0 106 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.83□□□□□ -0.68
PKP4-206ENST00000452162 IPMKQ8NFU5 416 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 ATP2A3Q93084 1043 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 CEP295NLQ96MC4 621 aa10.83□□□□□ -0.68
PKP4-206ENST00000452162 ZNF778Q96MU6 729 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms