RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 EFL1Q7Z2Z2 1120 aaKnown RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 ZNF843Q8N446 348 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 LMX1AQ8TE12 382 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 RXFP2Q8WXD0 754 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CENPIQ92674 756 aaPredicted RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 VOPP1Q96AW1 172 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CENPTQ96BT3 561 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 KLHL32Q96NJ5 620 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 LRRC61Q9BV99 259 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CLSTN2Q9H4D0 955 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CAAP1Q9H8G2 361 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 DNAI1Q9UI46 699 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 GGT7Q9UJ14 662 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 SATB2Q9UPW6 733 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 ITM2BQ9Y287 266 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 ACTL7AQ9Y615 435 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 SPTA1P02549 2419 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CPED1A4D0V7 1026 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 KLK10O43240 276 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 KDELR3O43731 214 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 TM7SF2O76062 418 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 TMCC1O94876 653 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 IGSF6O95976 241 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 PLA2G2AP14555 144 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 GKP32189 559 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 IGFALSP35858 605 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 BLKP51451 505 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 HDAC4P56524 1084 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 SKOR1P84550 965 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 FMO1Q01740 532 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 RAD51Q06609 339 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 VAC14Q08AM6 782 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 ELP6Q0PNE2 266 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
USP1-204ENST00000452143 C15orf59Q2T9L4 293 aaPredicted RBP11.03□□□□□ -0.64
USP1-204ENST00000452143 MYLK3Q32MK0 819 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 INO80DQ53TQ3 878 aaPredicted RBP11.03□□□□□ -0.64
USP1-204ENST00000452143 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 PRRT3Q5FWE3 981 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 GDPD4Q6W3E5 623 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 ZNF605Q86T29 641 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 PHACTR4Q8IZ21 702 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 RBFAQ8N0V3 343 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 SDR16C5Q8N3Y7 309 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 ARL14Q8N4G2 192 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 CXorf40AQ8TE69 158 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 ATXN7L3BQ96GX2 97 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
USP1-204ENST00000452143 VCPIP1Q96JH7 1222 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 SLC46A1Q96NT5 459 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 TTYH3Q9C0H2 523 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 GANQ9H2C0 597 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 DKK3Q9UBP4 350 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 MFHAS1Q9Y4C4 1052 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 ENTPD2Q9Y5L3 495 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 TLN1Q9Y490 2541 aaKnown RBP11.03□□□□□ -0.64
USP1-204ENST00000452143 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
USP1-204ENST00000452143 FAM170AA1A519 330 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 CDRT15L2A8MXV6 281 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 MUSKO15146 869 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 BUB1O43683 1085 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 GCATO75600 419 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 GFPT2O94808 682 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 ANXA6P08133 673 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 PLEKP08567 350 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 KRT3P12035 628 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 SOX5P35711 763 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 PEX5P50542 639 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 AIF1P55008 147 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 JAM2P57087 298 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 YBEYP58557 167 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 RHOAP61586 193 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 PPARDQ03181 441 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 SPIDRQ14159 915 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 GRM3Q14832 879 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 PARP15Q460N3 678 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 RAB6CQ53S08 254 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 TAF1BQ53T94 588 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 ATXN7L2Q5T6C5 722 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 CLEC14AQ86T13 490 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 VPS36Q86VN1 386 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 SLC35F3Q8IY50 421 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 FSTL5Q8N475 847 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 CCDC185Q8N715 623 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 ARL10Q8N8L6 244 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 RTL3Q8N8U3 475 aaKnown RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 TP53I13Q8NBR0 393 aaPredicted RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 WDR36Q8NI36 951 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms