RNA–Protein interactions for RNA: ENST00000451060.6

POLDIP3-205, Transcript of DNA polymerase delta interacting protein 3, human

TSL 2 BASIC

Gene POLDIP3, Length 3,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLDIP3-205	ENST00000451060	SPPL2C	Q8IUH8	684 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	EXOC8	Q8IYI6	725 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	PELI3	Q8N2H9	469 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	SH3RF2	Q8TEC5	729 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	AFG1L	Q8WV93	481 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	LRRC4	Q9HBW1	653 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	SPAG4	Q9NPE6	437 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	THEG	Q9P2T0	379 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	SUCO	Q9UBS9	1254 aa	Known RBP	11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	CIDEB	Q9UHD4	219 aa		11.22	□□□□□ -0.61
POLDIP3-205	ENST00000451060	NFKBIE	O00221	500 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	DFFA	O00273	331 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	GPC4	O75487	556 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	HOXA11	P31270	313 aa	Predicted RBP	11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	NOS2	P35228	1153 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	TKTL1	P51854	596 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	NHSL2	Q5HYW2	709 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	FAM35A	Q86V20	835 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	SIX6OS1	Q8N1H7	587 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	WNT8B	Q93098	351 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	MED10	Q9BTT4	135 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	ULBP1	Q9BZM6	244 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	DDIT4	Q9NX09	232 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	NCKIPSD	Q9NZQ3	722 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	MID2	Q9UJV3	735 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	BRCA2	P51587	3418 aa		11.21	□□□□□ -0.61
POLDIP3-205	ENST00000451060	PPP6C	O00743	305 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	STAU1	O95793	577 aa	Known RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	APOA4	P06727	396 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	NCAM1	P13591	858 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	GRM5	P41594	1212 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CSRP3	P50461	194 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CDH13	P55290	713 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CREB5	Q02930	508 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	GPR107	Q5VW38	600 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TTC33	Q6PID6	262 aa	Predicted RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	GPR141	Q7Z602	305 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	ZNF554	Q86TJ5	538 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	RETREG3	Q86VR2	466 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	EPHX4	Q8IUS5	362 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TTC39C	Q8N584	583 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CYGB	Q8WWM9	190 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SNX27	Q96L92	541 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	C3orf30	Q96M34	536 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	NFKBIZ	Q9BYH8	718 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CLK4	Q9HAZ1	481 aa	Known RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SH3BP1	Q9Y3L3	701 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060		A0A1W2PPW3	197 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	DLGAP1	O14490	977 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	PMPCB	O75439	489 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	DAB1	O75553	588 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	USP17L7	P0C7H9	530 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CYP2C8	P10632	490 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	OXTR	P30559	389 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CXCR3	P49682	368 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CDH17	Q12864	832 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	FBXO48	Q5FWF7	155 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CUZD1	Q86UP6	607 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	IFNE	Q86WN2	208 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	DHFR2	Q86XF0	187 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	BEST2	Q8NFU1	509 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	GIPC3	Q8TF64	312 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	OTUD5	Q96G74	571 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	MAEL	Q96JY0	434 aa	Known RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	OSMR	Q99650	979 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	OLFM1	Q99784	485 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	FICD	Q9BVA6	458 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	RHOBTB2	Q9BYZ6	727 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SIK2	Q9H0K1	926 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	MRPL46	Q9H2W6	279 aa	Known RBP	11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TMEM30A	Q9NV96	361 aa		11.21	□□□□□ -0.62
POLDIP3-205	ENST00000451060	UBFD1	O14562	309 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CNMD	O75829	334 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	YBX3	P16989	372 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	9e-7	■□□□□ 9
POLDIP3-205	ENST00000451060	CES1	P23141	567 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SLC7A1	P30825	629 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	PCSK7	Q16549	785 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	RWDD4	Q6NW29	188 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	PAQR9	Q6ZVX9	377 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	CATSPER4	Q7RTX7	472 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	B3GALNT2	Q8NCR0	500 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	RDH11	Q8TC12	318 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	WDR6	Q9NNW5	1121 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	DSE	Q9UL01	958 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	PADI4	Q9UM07	663 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	ANKRD6	Q9Y2G4	727 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SSC5D	A1L4H1	1573 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	PAPPA2	Q9BXP8	1791 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TCRBV3S1	A0A5B6	114 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SLCO1B7	G3V0H7	640 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	NR5A2	O00482	541 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SRP72	O76094	671 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	SNRPB2	P08579	225 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	VARS	P26640	1264 aa	Known RBP	11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	STX5	Q13190	355 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	FGD3	Q5JSP0	725 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	TBCEL	Q5QJ74	424 aa		11.2	□□□□□ -0.62
POLDIP3-205	ENST00000451060	KIAA0319	Q5VV43	1072 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms