RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 E7ENX8 843 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 GABRDO14764 452 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 ATP6V1G1O75348 118 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 ANXA9O76027 345 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 KCNA5P22460 613 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 RPL5P46777 297 aaKnown RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 CXCR3P49682 368 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 NADK2Q4G0N4 442 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 NEPROQ6NW34 567 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 AMIGO2Q86SJ2 522 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 DQX1Q8TE96 717 aaKnown RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 MYLPFQ96A32 169 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 NDFIP2Q9NV92 336 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 SNX13Q9Y5W8 968 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 DYTNA2CJ06 578 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.32
SHC1-210ENST00000448116 TFAP2AP05549 437 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 SMIM18P0DKX4 95 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.32
SHC1-210ENST00000448116 INTS6LQ5JSJ4 861 aaKnown RBP13.02□□□□□ -0.32
SHC1-210ENST00000448116 MARVELD2Q8N4S9 558 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.32
SHC1-210ENST00000448116 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 IL1RL2Q9HB29 575 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 MIOSQ9NXC5 875 aa13.02□□□□□ -0.32
SHC1-210ENST00000448116 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 PSMD3O43242 534 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 BCAS2O75934 225 aaPredicted RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 CCDC166P0CW27 439 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 LHX1P48742 406 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 PSEN2P49810 448 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 PRKAA2P54646 552 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 LSAMPQ13449 338 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 FASTKQ14296 549 aaKnown RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 GEN1Q17RS7 908 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 DCLRE1AQ6PJP8 1040 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 CPSF7Q8N684 471 aaKnown RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 CATSPER1Q8NEC5 780 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 ADCY4Q8NFM4 1077 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 ZNF419Q96HQ0 510 aaPredicted RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.33
SHC1-210ENST00000448116 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
SHC1-210ENST00000448116 TRIM38O00635 465 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 UBDO15205 165 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 ZSCAN9O15535 394 aaPredicted RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 DENRO43583 198 aaKnown RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 F2P00734 622 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 THP07101 528 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 FAM58BPP0C7Q3 252 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 CPB1P15086 417 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 ATP5F1P24539 256 aaPredicted RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 ARNTP27540 789 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 SCNN1GP51170 649 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 MAXP61244 160 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 CLEC6AQ6EIG7 209 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 OR9I1Q8NGQ6 314 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 EZH1Q92800 747 aaPredicted RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 SMARCD1Q96GM5 515 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 GPR78Q96P69 363 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 MRPL57Q9BQC6 102 aaKnown RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 DNAH12Q6ZR08 3092 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 A0A1B0GTW7 788 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TARM1B6A8C7 271 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 AP3B1O00203 1094 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 SLC4A1P02730 911 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 PAMP19021 973 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 LRPAP1P30533 357 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 FRG1Q14331 258 aaKnown RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 PIWIL4Q7Z3Z4 852 aaKnown RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TNFRSF12AQ9NP84 129 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 RAB26Q9ULW5 256 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TCAF1Q9Y4C2 921 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 AP4S1Q9Y587 144 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 PSMD12O00232 456 aaPredicted RBP13.01□□□□□ -0.33
SHC1-210ENST00000448116 PEX14O75381 377 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 B3GAT3O94766 335 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 HLA-DQB2P05538 268 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 COL6A2P12110 1019 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 BRCC3P46736 316 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 GEMP55040 296 aa13.01□□□□□ -0.33
SHC1-210ENST00000448116 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms