RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 LRRC73Q5JTD7 316 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ERMARDQ5T6L9 678 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 AFMIDQ63HM1 303 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KDM7AQ6ZMT4 941 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TTC7BQ86TV6 843 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KCTD15Q96SI1 283 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EIF3CQ99613 913 aaKnown RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EDEM3Q9BZQ6 932 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NLGN3Q9NZ94 848 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 LHX6Q9UPM6 363 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 J3KR12 359 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NEMP1O14524 444 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FPGTO14772 594 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FFAR2O15552 330 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CKMT1AP12532 417 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ITIH2P19823 946 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 MIPP30301 263 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HNRNPKP61978 463 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 INSM1Q01101 510 aaPredicted RBP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RAD51Q06609 339 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PARGQ86W56 976 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ARHGAP12Q8IWW6 846 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FAM181AQ8N9Y4 354 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EXOC2Q96KP1 924 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DNAJC28Q9NX36 388 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DONSONQ9NYP3 566 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 UBA2Q9UBT2 640 aaPredicted RBP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PNMA8BQ9ULN7 279 aaPredicted RBP16.04■□□□□ 0.16
SPTLC1P1-201ENST00000447199 K7ESM1 405 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EEF2KO00418 725 aaKnown RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 LRCH4O75427 683 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PIGNO95427 931 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DESP17661 470 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 IGFALSP35858 605 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PBX1P40424 430 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RGRP47804 291 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EIF2B5Q13144 721 aaKnown RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TMEM52BQ4KMG9 183 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HGSNATQ68CP4 663 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RFX8Q6ZV50 586 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PSTKQ8IV42 348 aaKnown RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DCBLD1Q8N8Z6 715 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF548Q8NEK5 533 aaPredicted RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SCUBE2Q9NQ36 999 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ATRXP46100 2492 aa16.03■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NEMP2A6NFY4 417 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 MMP20O60882 483 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NEBLO76041 1014 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ALPPL2P10696 532 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SKILP12757 684 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ERCC2P18074 760 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CSNK1DP48730 415 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HCAR3P49019 387 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SUOXP51687 545 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RTP5Q14D33 572 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 C19orf48Q6RUI8 117 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NPWQ8N729 165 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CXorf40AQ8TE69 158 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 APOLD1Q96LR9 279 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DUSP23Q9BVJ7 150 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NRSN2Q9GZP1 204 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SUV39H2Q9H5I1 410 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 MBNL1Q9NR56 388 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CSNK1G3Q9Y6M4 447 aa16.02■□□□□ 0.16
SPTLC1P1-201ENST00000447199 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.15
SPTLC1P1-201ENST00000447199 A0A087WV48 116 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 ARHGAP42A6NI28 874 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 PRPSAP2O60256 369 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 TM7SF2O76062 418 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 RNF8O76064 485 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 MYBL1P10243 752 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 MYF5P13349 255 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 ZNF135P52742 658 aaPredicted RBP16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 YPEL5P62699 121 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 DAB2P98082 770 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 E2F1Q01094 437 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 DPYSQ14117 519 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 GRM3Q14832 879 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 UGP2Q16851 508 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 COL28A1Q2UY09 1125 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 CDCP2Q5VXM1 449 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
SPTLC1P1-201ENST00000447199 TSEN2Q8NCE0 465 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms