RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 HLA-BQ31612 363 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 TMEM259Q4ZIN3 620 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 SETMARQ53H47 684 aaPredicted RBP15□□□□□ -0.01
HDAC4-204ENST00000446876 FAM182AQ5T1J6 154 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 LRRC38Q5VT99 294 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 NAPEPLDQ6IQ20 393 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 MFSD7Q6UXD7 560 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 PLD5Q8N7P1 536 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF599Q96NL3 588 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 PSKH2Q96QS6 385 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 CPEB1Q9BZB8 566 aaKnown RBP15□□□□□ -0.01
HDAC4-204ENST00000446876 GAREM1Q9H706 876 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 NEMP1O14524 444 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 AP1G1O43747 822 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 MMP13P45452 471 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 VAV2P52735 878 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 C21orf59P57076 290 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DYNLT1P63172 113 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 SEMG2Q02383 582 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 PRAMEF14Q5SWL7 426 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 C11orf63Q6NUN7 778 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 NEK5Q6P3R8 708 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 NPNTQ6UXI9 565 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DAAM2Q86T65 1068 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 KIAA1328Q86T90 577 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 TTC7BQ86TV6 843 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 RFX6Q8HWS3 928 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 KRT35Q92764 455 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 ZDHHC5Q9C0B5 715 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 SUV39H2Q9H5I1 410 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DNAAF2Q9NVR5 837 aaKnown RBP14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DDX56Q9NY93 547 aaKnown RBP14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DTLQ9NZJ0 730 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 DKK3Q9UBP4 350 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 TRIM10Q9UDY6 481 aa14.99□□□□□ -0.01
HDAC4-204ENST00000446876 TSPAN11A1L157 253 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 IGLON5A6NGN9 336 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 H0Y8X5 98 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 APOL1O14791 398 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 GIPC1O14908 333 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 AREL1O15033 823 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 VILLO15195 856 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 RAD51BO15315 384 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 PSTPIP1O43586 416 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 CER1O95813 267 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 CTSKP43235 329 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 CSNK1DP48730 415 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 RENBPP51606 427 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
HDAC4-204ENST00000446876 CLDN2P57739 230 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 IL9RQ01113 521 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 ODF2Q5BJF6 829 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 PPM1JQ5JR12 505 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 MARC1Q5VT66 337 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 SLC9A4Q6AI14 798 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 KIAA1161Q6NSJ0 714 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 KDM7AQ6ZMT4 941 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 B4GALNT4Q76KP1 1039 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC4-204ENST00000446876 DEFB124Q8NES8 71 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-204ENST00000446876 NSMCE1Q8WV22 266 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 RAB7BQ96AH8 199 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 TUBGCP5Q96RT8 1024 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 MGME1Q9BQP7 344 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 WRAP53Q9BUR4 548 aaKnown RBP14.98□□□□□ -0.01
HDAC4-204ENST00000446876 ATP13A3Q9H7F0 1226 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 NT5MQ9NPB1 228 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
HDAC4-204ENST00000446876 DMTF1Q9Y222 760 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 HEY1Q9Y5J3 304 aa14.98□□□□□ -0.01
HDAC4-204ENST00000446876 CNOT1A5YKK6 2376 aaKnown RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 MED19A0JLT2 244 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 UPK3BL1B0FP48 263 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF487B1APH4 448 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 UPK3BL2E5RIL1 263 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PRAMEF26H0Y7S4 382 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PJA2O43164 708 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 TSPAN6O43657 245 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 MMP20O60882 483 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PAK4O96013 591 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 KRT10P13645 584 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 CD59P13987 128 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 CR2P20023 1033 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 HNRNPA2B1P22626 353 aaKnown RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 XPAP23025 273 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 SERPINA4P29622 427 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 CDKN2BP42772 138 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 AP1S1P61966 158 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 RPS21P63220 83 aaKnown RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 BCL2L1Q07817 233 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 NSUN2Q08J23 767 aaKnown RBP eCLIP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 GRM3Q14832 879 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 IFI16Q16666 785 aaKnown RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 CFAP58Q5T655 872 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 KAZNQ674X7 775 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PSAPL1Q6NUJ1 521 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 SPOCD1Q6ZMY3 1216 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms