RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PSMD12O00232 456 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 MT-ND1P03886 318 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 TAF6P49848 677 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 CHST15Q7LFX5 561 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 SETD3Q86TU7 594 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 CHERPQ8IWX8 916 aaKnown RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 DNAJB3Q8WWF6 145 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 DLG3Q92796 817 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 SLC2A11Q9BYW1 496 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 OLAHQ9NV23 265 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 PLK2Q9NYY3 685 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 RCOR3Q9P2K3 495 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 V9GYQ6 96 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 UBDO15205 165 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 KCNC1P48547 511 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 CSE1LP55060 971 aaKnown RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 CAPRIN1Q14444 709 aaKnown RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 IFNEQ86WN2 208 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 IFNLR1Q8IU57 520 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 NT5C3BQ969T7 300 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 OLFM1Q99784 485 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
ERCC3-203ENST00000445889 UBQLN1Q9UMX0 589 aaKnown RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 FAF1Q9UNN5 650 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-203ENST00000445889 H2AFYO75367 372 aaKnown RBP14.34□□□□□ -0.11
ERCC3-203ENST00000445889 TADA2AO75478 443 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 H6PDO95479 791 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 CES1P23141 567 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 HSPA13P48723 471 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 SLC12A2P55011 1212 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 NOL9Q5SY16 702 aaKnown RBP14.34□□□□□ -0.11
ERCC3-203ENST00000445889 KLHL35Q6PF15 583 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 ANKRD49Q8WVL7 239 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 C3orf30Q96M34 536 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 PIF1Q9H611 641 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 VPS28Q9UK41 221 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 DSEQ9UL01 958 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 LRRC14BA6NHZ5 514 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 CCDC166P0CW27 439 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 NPY2RP49146 381 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 LPIN1Q14693 890 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 PKN3Q6P5Z2 889 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 CHSY3Q70JA7 882 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 SPPL2CQ8IUH8 684 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 ZNF786Q8N393 782 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 TNIP3Q96KP6 325 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 SMOQ99835 787 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 MRPL46Q9H2W6 279 aaKnown RBP14.34□□□□□ -0.11
ERCC3-203ENST00000445889 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 CRTAC1Q9NQ79 661 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
ERCC3-203ENST00000445889 HEATR9A2RTY3 570 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 UBFD1O14562 309 aaKnown RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 MRASO14807 208 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 SUPT7LO94864 414 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 MAXP61244 160 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 LRP8Q14114 963 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 FAM83EQ2M2I3 478 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ANKDD1AQ495B1 522 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 PRAMEF19Q5SWL8 479 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 NOTUMQ6P988 496 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 RMND5BQ96G75 393 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 HAUS8Q9BT25 410 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ADAMTS10Q9H324 1103 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 VTI1BQ9UEU0 232 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 MYRFQ9Y2G1 1151 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 OR51F1A6NGY5 319 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 DDNO94850 711 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 SLC25A27O95847 323 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 SLC4A1P02730 911 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ZNF23P17027 643 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 RPL34P49207 117 aaKnown RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ENTPD1P49961 510 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 CTBSQ01459 385 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 RHDQ02161 417 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 KYAT1Q16773 422 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 GEN1Q17RS7 908 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ALKAL1Q6UXT8 129 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 CUZD1Q86UP6 607 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 PIM3Q86V86 326 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 CLVS1Q8IUQ0 354 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 TMEM126BQ8IUX1 230 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 ZMIZ2Q8NF64 920 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 MIPOL1Q8TD10 442 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 PCED1BQ96HM7 432 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 HNRNPABQ99729 332 aaKnown RBP14.33□□□□□ -0.12
ERCC3-203ENST00000445889 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
ERCC3-203ENST00000445889 CDC14AQ9UNH5 594 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms