RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 MIEF2Q96C03 454 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 EBNA1BP2Q99848 306 aaKnown RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 WRAP53Q9BUR4 548 aaKnown RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 KPNA6O60684 536 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 RTN3O95197 1032 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 SNHG28P0DPA3 235 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 CNTFP26441 200 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 S100A3P33764 101 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PGGT1BP53609 377 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 KLF1Q13351 362 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 ARL14EPQ8N8R7 260 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 ITFG1Q8TB96 612 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 ATG10Q9H0Y0 220 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 LRRC19Q9H756 370 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PRKAG3Q9UGI9 489 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 LYVE1Q9Y5Y7 322 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 ARHGEF28Q8N1W1 1705 aaKnown RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 HACD1B0YJ81 288 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 ERAL1O75616 437 aaKnown RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 MAGP20916 626 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 IL2P60568 153 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 RNASE12Q5GAN4 147 aaKnown RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 SERPINA13PQ6UXR4 307 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 FUKQ8N0W3 1084 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PPP1R2P1Q96PQ5 205 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PTPN18Q99952 460 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 ALG2Q9H553 416 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 COMMD8Q9NX08 183 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PCYOX1Q9UHG3 505 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 APOA1P02647 267 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 NR2C2P49116 596 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PRKG2Q13237 762 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 VANGL1Q8TAA9 524 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 CSGALNACT1Q8TDX6 532 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 CENPTQ96BT3 561 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 CCDC126Q96EE4 140 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 HMCESQ96FZ2 354 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 PGM2Q96G03 612 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 DCLRE1BQ9H816 532 aa8.06□□□□□ -1.12
RIF1-205ENST00000444746 CAB39Q9Y376 341 aaPredicted RBP8.06□□□□□ -1.12
RIF1-205ENST00000444746 MAGEB16A2A368 324 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TLL1O43897 1013 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 LRCH4O75427 683 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 WBP4O75554 376 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 METTL18O95568 372 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 KRT6AP02538 564 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 KRT6BP04259 564 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ACADSP16219 412 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 NR4A1P22736 598 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 FASP25445 335 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 YAP1P46937 504 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 KRT6CP48668 564 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 IRF9Q00978 393 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 RUNX1T1Q06455 604 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MTX3Q5HYI7 312 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 LPCAT2Q7L5N7 544 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 GALNT5Q7Z7M9 940 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TMEM86AQ8N2M4 240 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ANKRD49Q8WVL7 239 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 PCED1BQ96HM7 432 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 GKN1Q9NS71 199 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MAT2BQ9NZL9 334 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 RBPJLQ9UBG7 517 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 CILPO75339 1184 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 XKR6Q5GH73 641 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MON1BQ7L1V2 547 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 APTXQ7Z2E3 356 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 UNC93AQ86WB7 457 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 KBTBD2Q8IY47 623 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 STX19Q8N4C7 294 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 HIPK3Q9H422 1215 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 POLG2Q9UHN1 485 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ARL5CA6NH57 179 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 OR2AG2A6NM03 316 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 CORO1AP31146 461 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 GRK3P35626 688 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ARL2P36404 184 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MATKP42679 507 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TUFMP49411 452 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 SYPL2Q5VXT5 272 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ESRP1Q6NXG1 681 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 SLC9A9Q8IVB4 645 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ZNF276Q8N554 614 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MCOLN3Q8TDD5 553 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 TWNKQ96RR1 684 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 OSBPL10Q9BXB5 764 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 VPS9D1Q9Y2B5 631 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 KLHL20Q9Y2M5 609 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MAP2P11137 1827 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 NCAM2O15394 837 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 ME2P23368 584 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MAT2AP31153 395 aaKnown RBP8.05□□□□□ -1.12
RIF1-205ENST00000444746 OR4K2Q8NGD2 314 aa8.05□□□□□ -1.12
RIF1-205ENST00000444746 MARCH7Q9H992 704 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms