RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MAFKO60675 156 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 TIMP2P16035 220 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 PRLRP16471 622 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 MAGEA1P43355 309 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 LBRQ14739 615 aaKnown RBP18.84■□□□□ 0.61
CCDC188-202ENST00000444532 OXR1Q8N573 874 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 ATPAF2Q8N5M1 289 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 ASB12Q8WXK4 309 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 KLHDC7BQ96G42 594 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 ELF4Q99607 663 aaPredicted RBP18.84■□□□□ 0.61
CCDC188-202ENST00000444532 C1QTNF2Q9BXJ5 285 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 ATP13A3Q9H7F0 1226 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 PCDHB9Q9Y5E1 797 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 HS3ST3A1Q9Y663 406 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 A0A1B0GTQ1 180 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 TSPAN11A1L157 253 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 YKT6O15498 198 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 FLRT2O43155 660 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 BUB1BO60566 1050 aaPredicted RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 PEX11BO96011 259 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SERPINA4P29622 427 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 CYLC1P35663 651 aaPredicted RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 HSPA9P38646 679 aaKnown RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SLC1A1P43005 524 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 RGRP47804 291 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SLC10A7Q0GE19 358 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SGCGQ13326 291 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 PAFAH1B3Q15102 231 aaKnown RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SPA17Q15506 151 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 ZFYVE27Q5T4F4 411 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 LRRC38Q5VT99 294 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 BRAT1Q6PJG6 821 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 BBS5Q8N3I7 341 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 PCDH19Q8TAB3 1148 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 SETD7Q8WTS6 366 aaKnown RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 NSMCE1Q8WV22 266 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 FAF2Q96CS3 445 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 CAMK1GQ96NX5 476 aa18.83■□□□□ 0.6
CCDC188-202ENST00000444532 LENG8Q96PV6 779 aaPredicted RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 LUC7LQ9NQ29 371 aaKnown RBP18.83■□□□□ 0.6
CCDC188-202ENST00000444532 ANKRD36A6QL64 1941 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 SPTBN2O15020 2390 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 IGLON5A6NGN9 336 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 ZNF487B1APH4 448 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 SPINT1O43278 529 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 CBFA2T3O75081 653 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 PIGNO95427 931 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 PAK4O96013 591 aaPredicted RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 XPAP23025 273 aaPredicted RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 KDELR1P24390 212 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 ARRB1P49407 418 aaPredicted RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 HADHBP55084 474 aaKnown RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 AP1S1P61966 158 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 ELP6Q0PNE2 266 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 ZNF235Q14590 738 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 TRIP6Q15654 476 aaKnown RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 UGP2Q16851 508 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 CFAP58Q5T655 872 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 NCBP2-AS2Q69YL0 99 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 VSIG1Q86XK7 387 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 SPATS2Q86XZ4 545 aaKnown RBP18.82■□□□□ 0.6
CCDC188-202ENST00000444532 CAMK1DQ8IU85 385 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 TMTC1Q8IUR5 882 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 FZD3Q9NPG1 666 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 PCOLCE2Q9UKZ9 415 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 ITM2BQ9Y287 266 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 SHROOM3Q8TF72 1996 aa18.82■□□□□ 0.6
CCDC188-202ENST00000444532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.81■□□□□ 0.6
CCDC188-202ENST00000444532 MUSKO15146 869 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 FECHP22830 423 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 GARSP41250 739 aaKnown RBP18.81■□□□□ 0.6
CCDC188-202ENST00000444532 RXRGP48443 463 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 SCNN1BP51168 640 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 SIM1P81133 766 aaPredicted RBP18.81■□□□□ 0.6
CCDC188-202ENST00000444532 BCL2L1Q07817 233 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 GALNT2Q10471 571 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 FGL2Q14314 439 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 MARC1Q5VT66 337 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 ABI3BPQ7Z7G0 1075 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 DCP2Q8IU60 420 aaKnown RBP18.81■□□□□ 0.6
CCDC188-202ENST00000444532 RHBDD1Q8TEB9 315 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 RAPGEF5Q92565 580 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 MYOCQ99972 504 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 KLHL11Q9NVR0 708 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 GGT7Q9UJ14 662 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 CA5BQ9Y2D0 317 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 PCDHA13Q9Y5I0 950 aa18.81■□□□□ 0.6
CCDC188-202ENST00000444532 CABIN1Q9Y6J0 2220 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 SPAARA0A1B0GVQ0 90 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 A6NNZ2 444 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 MFSD11O43934 449 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 THEGLP0DJG4 465 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 PMLP29590 882 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 GRK6P43250 576 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 NOP2P46087 812 aaKnown RBP18.8■□□□□ 0.6
CCDC188-202ENST00000444532 POLR2LP62875 67 aaKnown RBP18.8■□□□□ 0.6
CCDC188-202ENST00000444532 IFI16Q16666 785 aaKnown RBP18.8■□□□□ 0.6
CCDC188-202ENST00000444532 INAVAQ3KP66 663 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 TMEM52BQ4KMG9 183 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 RALGPS1Q5JS13 557 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms