RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 RCOR2Q8IZ40 523 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 RYBPQ8N488 228 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 ZCCHC9Q8N567 271 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 GANCQ8TET4 914 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 PIGKQ92643 395 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 RBM41Q96IZ5 413 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CCDC114Q96M63 670 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NUDCD1Q96RS6 583 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 FAM118BQ9BPY3 351 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 TLR10Q9BXR5 811 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NT5MQ9NPB1 228 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 DKK3Q9UBP4 350 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 AMFRQ9UKV5 643 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 A0A1W2PR77 199 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 LNP1A1A4G5 178 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 HTRA2O43464 458 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 FZD6O60353 706 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 LRP3O75074 770 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 FSBPO95073 299 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 GM2AP17900 193 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 TGM2P21980 687 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 CCR5P51681 352 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 RWDD2BP57060 319 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 IRX4P78413 519 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 SEMG2Q02383 582 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 NSUN2Q08J23 767 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 WASHC5Q12768 1159 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 RALGDSQ12967 914 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 NOMO1Q15155 1222 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF284Q2VY69 593 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 MEI1Q5TIA1 1274 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 TRIM69Q86WT6 500 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 CCDC13Q8IYE1 715 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 KIAA2013Q8IYS2 634 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 OR2I1PQ8NGU4 316 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 KLK6Q92876 244 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 LRIG1Q96JA1 1093 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 SLC6A18Q96N87 628 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 QKIQ96PU8 341 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 OSBPL8Q9BZF1 889 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 SUV39H2Q9H5I1 410 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 NCKAP1Q9Y2A7 1128 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 CA5BQ9Y2D0 317 aa12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-212ENST00000443561 A0A0U1RQS6 177 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 A0A1W2PPC4 97 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 MEI4A8MW99 385 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 RAD51BO15315 384 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 AP1G1O43747 822 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 KRT86O43790 486 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 PRLP01236 227 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 JCHAINP01591 159 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 PDHA1P08559 390 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 CCNB1P14635 433 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 PTPN3P26045 913 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 MAT2AP31153 395 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 SCNN1BP51168 640 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 COPS2P61201 443 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 AP1S1P61966 158 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF235Q14590 738 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 FOXJ1Q92949 421 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 TUBGCP5Q96RT8 1024 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 SEMA3CQ99985 751 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 OSBPL1AQ9BXW6 950 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 RBM22Q9NW64 420 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
PDLIM2-212ENST00000443561 A0A1W2PQU0 124 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 MIF4GDA9UHW6 222 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 UPK3BL1B0FP48 263 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 UPK3BL2E5RIL1 263 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 CDX4O14627 284 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 FANCGO15287 622 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 APOC2P02655 101 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms