RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 FAM71BQ8TC56 605 aa22.39■■□□□ 1.17
HDLBP-220ENST00000442730 KLHDC7BQ96G42 594 aa22.39■■□□□ 1.17
HDLBP-220ENST00000442730 TRIM5Q9C035 493 aa22.39■■□□□ 1.17
HDLBP-220ENST00000442730 AKAP13Q12802 2813 aa22.39■■□□□ 1.17
HDLBP-220ENST00000442730 MAP1BP46821 2468 aaKnown RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 ASPMQ8IZT6 3477 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 IGLON5A6NGN9 336 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 RAD51BO15315 384 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 TRIM16O95361 564 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 TMEM253P0C7T8 217 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 SSR1P43307 286 aaKnown RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 RXRGP48443 463 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 CDH6P55285 790 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 KRT81Q14533 505 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 RFTN1Q14699 578 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 RAB44Q7Z6P3 723 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 TTC7BQ86TV6 843 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 CNGA4Q8IV77 575 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 SLC22A18ASQ8N1D0 253 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 OR13H1Q8NG92 308 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 CINPQ9BW66 212 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 SCNM1Q9BWG6 230 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 NHEJ1Q9H9Q4 299 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 SPTLC3Q9NUV7 552 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 TOR4AQ9NXH8 423 aa22.38■■□□□ 1.17
HDLBP-220ENST00000442730 RCOR3Q9P2K3 495 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-220ENST00000442730 MUSKO15146 869 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 CD48P09326 243 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 TIMP2P16035 220 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 IL4RP24394 825 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 CSNK1DP48730 415 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 ARSEP51690 589 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 GRM3Q14832 879 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 HADHQ16836 314 aaKnown RBP22.37■■□□□ 1.17
HDLBP-220ENST00000442730 TMCO4Q5TGY1 634 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 KYAT3Q6YP21 454 aaKnown RBP22.37■■□□□ 1.17
HDLBP-220ENST00000442730 KANSL1Q7Z3B3 1105 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 SLCO6A1Q86UG4 719 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 ZNF599Q96NL3 588 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 TUBGCP5Q96RT8 1024 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 KLF6Q99612 283 aaPredicted RBP22.37■■□□□ 1.17
HDLBP-220ENST00000442730 GPR27Q9NS67 375 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 LCMT1Q9UIC8 334 aa22.37■■□□□ 1.17
HDLBP-220ENST00000442730 USP24Q9UPU5 2620 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 A6NNZ2 444 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 BUB1BO60566 1050 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 DKK1O94907 266 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 PEX11BO96011 259 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 PAK4O96013 591 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ITGAVP06756 1048 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ATXN1LP0C7T5 689 aaKnown RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ITIH2P19823 946 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 MAN1A1P33908 653 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 GJC1P36383 396 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 TAS2R40P59535 323 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 MMRN1Q13201 1228 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 SGCGQ13326 291 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 DPYSL3Q14195 570 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 PTAR1Q7Z6K3 402 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 SRLQ86TD4 932 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 PNPLA1Q8N8W4 532 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 HCAR2Q8TDS4 363 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ASB12Q8WXK4 309 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ADAMTS14Q8WXS8 1223 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 CCDC42Q96M95 316 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 ZNF641Q96N77 438 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 LENG8Q96PV6 779 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 PSKH2Q96QS6 385 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 CALN1Q9BXU9 219 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 SUV39H2Q9H5I1 410 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 KLHL11Q9NVR0 708 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 SEPT3Q9UH03 358 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 KLK13Q9UKR3 277 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 APOBEC2Q9Y235 224 aaKnown RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 HS3ST3A1Q9Y663 406 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 TRPM6Q9BX84 2022 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 IGF2RP11717 2491 aa22.36■■□□□ 1.17
HDLBP-220ENST00000442730 COL5A1P20908 1838 aaPredicted RBP22.36■■□□□ 1.17
HDLBP-220ENST00000442730 POM121BA6NF01 834 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 AKR1B15C9JRZ8 316 aaPredicted RBP22.35■■□□□ 1.17
HDLBP-220ENST00000442730 TNFSF14O43557 240 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 SERPINB6P35237 376 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 SUOXP51687 545 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 SLC10A7Q0GE19 358 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 LBRQ14739 615 aaKnown RBP22.35■■□□□ 1.17
HDLBP-220ENST00000442730 ATP13A4Q4VNC1 1196 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 BRAT1Q6PJG6 821 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 Q6ZSR6 202 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 ZSWIM9Q86XI8 627 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 CAMK1DQ8IU85 385 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 CHCHD4Q8N4Q1 142 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 ATPAF2Q8N5M1 289 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 DENND6BQ8NEG7 585 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 FAM174AQ8TBP5 190 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 BMFQ96LC9 184 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 ATP13A3Q9H7F0 1226 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 FTSJ1Q9UET6 329 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 NEUROG3Q9Y4Z2 214 aa22.35■■□□□ 1.17
HDLBP-220ENST00000442730 MAFKO60675 156 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms