RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AGGF1Q8N302 714 aaeCLIP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 OR52K1Q8NGK4 314 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 EPS8L3Q8TE67 593 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 ZSWIM3Q96MP5 696 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 EBNA1BP2Q99848 306 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 NAT9Q9BTE0 207 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 POLR1EQ9GZS1 481 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 IRF2BPLQ9H1B7 796 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 NSUN3Q9H649 340 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 BFARQ9NZS9 450 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 TBC1D14Q9P2M4 693 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 VPS28Q9UK41 221 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 ANAPC1Q9H1A4 1944 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 RGS16O15492 202 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 MT-CYBP00156 380 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SP100P23497 879 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 MAXP61244 160 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 GSTM4Q03013 218 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 NSUN2Q08J23 767 aaKnown RBP eCLIP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 RFTN1Q14699 578 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 RARS2Q5T160 578 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 AGBL2Q5U5Z8 902 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 IPMKQ8NFU5 416 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PGM2Q96G03 612 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 CFAP36Q96G28 342 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FEM1AQ9BSK4 669 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FSD1LQ9BXM9 530 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 CASS4Q9NQ75 786 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 VPS45Q9NRW7 570 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PIH1D1Q9NWS0 290 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PLK2Q9NYY3 685 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SH3GLB1Q9Y371 365 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 NUP205Q92621 2012 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PMPCBO75439 489 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 WFS1O76024 890 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 GSTA2P09210 222 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 TCF3P15923 654 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 MGAT1P26572 445 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 MZF1P28698 734 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 CD97P48960 835 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 CDH17Q12864 832 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FOXD4Q12950 439 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 OLIG2Q13516 323 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 ZNF77Q15935 545 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 BCL2A1Q16548 175 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 KLHL38Q2WGJ6 581 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 ANKRD13BQ86YJ7 626 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 MPP5Q8N3R9 675 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FBF1Q8TES7 1133 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 OTUB2Q96DC9 234 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 IMP4Q96G21 291 aaKnown RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PSKH2Q96QS6 385 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SMC6Q96SB8 1091 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 APOL2Q9BQE5 337 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 FAM192AQ9GZU8 254 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 STMN4Q9H169 189 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 ACSS3Q9H6R3 686 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 PPCSQ9HAB8 311 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SPO11Q9Y5K1 396 aa8.18□□□□□ -1.1
CCDC39-201ENST00000442201 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CDH16O75309 829 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 GLDCP23378 1020 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 STX2P32856 288 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CSKP41240 450 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 NPY2RP49146 381 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 DSC2Q02487 901 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 TCEAL5Q5H9L2 206 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CELF5Q8N6W0 485 aaKnown RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 DCAF4L2Q8NA75 395 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CYTH2Q99418 400 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 TBL1YQ9BQ87 522 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 FICDQ9BVA6 458 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 C2orf49Q9BVC5 232 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CINPQ9BW66 212 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 GBF1Q92538 1859 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 TCRBV9S1A1TA0A576 114 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 TMEM247A6NEH6 219 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 FSHRP23945 695 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CD86P42081 329 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 WNT3AP56704 352 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 CRADDP78560 199 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 HYAL1Q12794 435 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 FOXB2Q5VYV0 432 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 TMEM184AQ6ZMB5 413 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 UNC5AQ6ZN44 842 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 GPR149Q86SP6 731 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 PRPF39Q86UA1 669 aaKnown RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 PGBD5Q8N414 524 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 RIBC1Q8N443 379 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 SH2D3CQ8N5H7 860 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms