RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TSC1Q92574 1164 aa19.15■□□□□ 0.66
HMGB3P22-201ENST00000442010 ARHGEF26Q96DR7 871 aa19.15■□□□□ 0.66
HMGB3P22-201ENST00000442010 BTBD6Q96KE9 485 aa19.15■□□□□ 0.66
HMGB3P22-201ENST00000442010 CAAP1Q9H8G2 361 aa19.15■□□□□ 0.66
HMGB3P22-201ENST00000442010 GOLGA8CPA6NN73 597 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 A6NNZ2 444 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 ENC1O14682 589 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 DAPK3O43293 454 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 SDC3O75056 442 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 PIGNO95427 931 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 LDOC1O95751 146 aaPredicted RBP19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 ITIH2P19823 946 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 RGRP47804 291 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 CSNK1DP48730 415 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 SLC25A11Q02978 314 aaKnown RBP19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 SMTNL2Q2TAL5 461 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 BOLA3Q53S33 107 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 LRRC73Q5JTD7 316 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 Q6ZSR6 202 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 POLNQ7Z5Q5 900 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 TTC7BQ86TV6 843 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 DENND6BQ8NEG7 585 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 CENPTQ96BT3 561 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 IFT43Q96FT9 208 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 CNDP2Q96KP4 475 aaKnown RBP19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 NUP85Q9BW27 656 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZWILCHQ9H900 591 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZMIZ1Q9ULJ6 1067 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 PCDHGA1Q9Y5H4 931 aa19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.65
HMGB3P22-201ENST00000442010 ACACAQ13085 2346 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 BUB1BO60566 1050 aaPredicted RBP19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 RARAP10276 462 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 DNAJC3Q13217 504 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 SMAD1Q15797 465 aaKnown RBP19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 DCP2Q8IU60 420 aaKnown RBP19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 TSEN2Q8NCE0 465 aaKnown RBP19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 TEKT4Q8WW24 435 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 CALN1Q9BXU9 219 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 SUV39H2Q9H5I1 410 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 ETNK2Q9NVF9 386 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 IP6K2Q9UHH9 426 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 LRP4O75096 1905 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 DMXL2Q8TDJ6 3036 aa19.13■□□□□ 0.65
HMGB3P22-201ENST00000442010 FREM2Q5SZK8 3169 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 ASXL3Q9C0F0 2248 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 SPTY2D1-AS1A0A0U1RR47 76 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 NEMP1O14524 444 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 GIMD1P0DJR0 217 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 AMPD1P23109 780 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 DGKAP23743 735 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 ACADVLP49748 655 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 PFN3P60673 137 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 IL10RBQ08334 325 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 SGCGQ13326 291 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 FZD2Q14332 565 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 GRM3Q14832 879 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 ASTE1Q2TB18 679 aaPredicted RBP19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 TMEM52BQ4KMG9 183 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 TPRG1LQ5T0D9 272 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 CCDC122Q5T0U0 273 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 PTAR1Q7Z6K3 402 aaPredicted RBP19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 LZTR1Q8N653 840 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 FAM71BQ8TC56 605 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 NSMCE3Q96MG7 304 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZNF641Q96N77 438 aaPredicted RBP19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 TUBGCP5Q96RT8 1024 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 UCKL1Q9NWZ5 548 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 IPO11Q9UI26 975 aaKnown RBP19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 ANAPC7Q9UJX3 599 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 APC2O95996 2303 aa19.12■□□□□ 0.65
HMGB3P22-201ENST00000442010 H3BRJ5 948 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 DFFAO00273 331 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 TRIM38O00635 465 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 FPGTO14772 594 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 MUSKO15146 869 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 MMP20O60882 483 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 PALMO75781 387 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 PIAS2O75928 621 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 PEX11BO96011 259 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 TPM3P06753 285 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 C1SP09871 688 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 EIF4A3P38919 411 aaKnown RBP19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 RABIFP47224 123 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 SUOXP51687 545 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 RFTN1Q14699 578 aaPredicted RBP19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 UGP2Q16851 508 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 PROX2Q3B8N5 592 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 DHRS13Q6UX07 377 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 SRLQ86TD4 932 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZSWIM9Q86XI8 627 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 HSPH1Q92598 858 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 CSPG4P5Q96PW8 444 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 DNAJC7Q99615 494 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 SP110Q9HB58 689 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 PCDH18Q9HCL0 1135 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms