RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CD151P48509 253 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 NDUFV1P49821 464 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 GJA9P57773 515 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 MERTKQ12866 999 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 APOFQ13790 326 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SQLEQ14534 574 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 KCTD2Q14681 263 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 IMPG1Q17R60 797 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 STEAP4Q687X5 459 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ESRP1Q6NXG1 681 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 CNSTQ6PJW8 725 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CCDC81Q6ZN84 652 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 PIWIL4Q7Z3Z4 852 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 RIN3Q8TB24 985 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 FAM110BQ8TC76 370 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 HEXDCQ8WVB3 486 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 C9orf16Q9BUW7 83 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ASB7Q9H672 318 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 IGSF9Q9P2J2 1179 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 TUBGCP4Q9UGJ1 667 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 NCF1BA6NI72 391 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 NCF1CA8MVU1 366 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 E2F6O75461 281 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 AHSGP02765 367 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 NCF1P14598 390 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 PTPRAP18433 802 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CHRM3P20309 590 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ATP5F1P24539 256 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 LMO2P25791 158 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 MAGEA3P43357 314 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 RXRGP48443 463 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 RAD23AP54725 363 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SPIDRQ14159 915 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 AGAP9Q5VTM2 703 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CTU1Q7Z7A3 348 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 STK32CQ86UX6 486 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 BBS5Q8N3I7 341 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 TTC39CQ8N584 583 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ANKRD52Q8NB46 1076 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 IL22Q9GZX6 179 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 FANCEQ9HB96 536 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SPC25Q9HBM1 224 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 OLAHQ9NV23 265 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SUN2Q9UH99 717 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 A0A0J9YYE9 177 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SDHDO14521 159 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 PRKCGP05129 697 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ALOX15P16050 662 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 EMP3P54852 163 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SULT2A1Q06520 285 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZBTB17Q13105 803 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 PMS2P3Q13401 168 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 FRG1Q14331 258 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 ARHGAP17Q68EM7 881 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ARMCX2Q7L311 632 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZC3H7AQ8IWR0 971 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 TXNDC5Q8NBS9 432 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 APPL2Q8NEU8 664 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SLC45A3Q96JT2 553 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 HIPK3Q9H422 1215 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SMARCAD1Q9H4L7 1026 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 MID1IP1Q9NPA3 183 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ANKRD6Q9Y2G4 727 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 CRYL1Q9Y2S2 319 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 NDUFAF1Q9Y375 327 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 PCDHGA7Q9Y5G6 932 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZNFX1Q9P2E3 1918 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 TMEM247A6NEH6 219 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 BTBD19C9JJ37 291 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 GSTA4O15217 222 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 HBP1O60381 514 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 PFKMP08237 780 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZNF286BP0CG31 522 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 CYP2C8P10632 490 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.953e-9■□□□□ 10.5
COPB1-202ENST00000439561 MATKP42679 507 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 MAGEA6P43360 314 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 TKTL1P51854 596 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 MBTD1Q05BQ5 628 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 RAB39AQ14964 217 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 GPR180Q86V85 440 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZC3HC1Q86WB0 502 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ATPAF2Q8N5M1 289 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 OR52K2Q8NGK3 314 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 HM13Q8TCT9 377 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 KCTD14Q9BQ13 255 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 TUT1Q9H6E5 874 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 PCDH12Q9NPG4 1184 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SUCOQ9UBS9 1254 aaKnown RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 TBC1D30Q9Y2I9 924 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 TRAF6Q9Y4K3 522 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 UBA6A0AVT1 1052 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms