RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NAPRTQ6XQN6 538 aa14.04□□□□□ -0.16
PTCHD3-201ENST00000438700 RAPH1Q70E73 1250 aa14.04□□□□□ -0.16
PTCHD3-201ENST00000438700 SLC39A8Q9C0K1 460 aa14.04□□□□□ -0.16
PTCHD3-201ENST00000438700 EBF3Q9H4W6 596 aa14.04□□□□□ -0.16
PTCHD3-201ENST00000438700 PTPRSQ13332 1948 aa14.04□□□□□ -0.16
PTCHD3-201ENST00000438700 PHGDHO43175 533 aaKnown RBP14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 AVPR1AP37288 418 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 MAGEA12P43365 314 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 USP4Q13107 963 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 TUBB3Q13509 450 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 CUL3Q13618 768 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 GRM3Q14832 879 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 TBC1D25Q3MII6 688 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 ARTNQ5T4W7 220 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 PIK3R6Q5UE93 754 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 OTOP2Q7RTS6 562 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 C14orf80Q86SX3 495 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 APLFQ8IW19 511 aaPredicted RBP14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 SCUBE1Q8IWY4 988 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 TMEM199Q8N511 208 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 POU5F2Q8N7G0 328 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 SHCBP1LQ9BZQ2 653 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 MARCH2Q9P0N8 246 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 APOBEC2Q9Y235 224 aaKnown RBP14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 E9PAM4 449 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 SPECC1L-ADORA2AF8WAN1 911 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 MAFKO60675 156 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 PMPCBO75439 489 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 ZNF189O75820 626 aaPredicted RBP14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 SEC24AO95486 1093 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 SLC2A3P11169 496 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 GRK2P25098 689 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 HOXC13P31276 330 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 COG7P83436 770 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 CDK18Q07002 472 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 CDC16Q13042 620 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 RNF111Q6ZNA4 994 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 TMPRSS6Q8IU80 811 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 ULK2Q8IYT8 1036 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 ISL2Q96A47 359 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 ECSITQ9BQ95 431 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 FICDQ9BVA6 458 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 CCSER2Q9H7U1 834 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 OLA1Q9NTK5 396 aaKnown RBP14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 KIAA1671Q9BY89 1806 aa14.03□□□□□ -0.16
PTCHD3-201ENST00000438700 MAGEB16A2A368 324 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 TK2O00142 265 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 FGF10O15520 208 aaPredicted RBP14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 TIMM44O43615 452 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 HMBSP08397 361 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 LAG3P18627 525 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 GLRBP48167 497 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 NUMBP49757 651 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 IDH3AP50213 366 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 DSG1Q02413 1049 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 DENND6AQ8IWF6 608 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 CMTR2Q8IYT2 770 aaKnown RBP14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 ZNF781Q8N8C0 355 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 PYDC1Q8WXC3 89 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 YME1L1Q96TA2 773 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 UNKQ9C0B0 810 aaKnown RBP14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 CATSPERBQ9H7T0 1116 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 MAN1C1Q9NR34 630 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 AFF4Q9UHB7 1163 aaKnown RBP14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 PLA2G4CQ9UP65 541 aa14.02□□□□□ -0.16
PTCHD3-201ENST00000438700 MYLKQ15746 1914 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 NYNRINQ9P2P1 1898 aaKnown RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 G3V2L1 256 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 TLR5O60602 858 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 EFCAB14O75071 495 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 SIN3BO75182 1162 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 VAPBO95292 243 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 HLA-DQB2P05538 268 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 ZDHHC11BP0C7U3 371 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 CCNCP24863 283 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 HTR7P34969 479 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 GRIA2P42262 883 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 RAP1GDS1P52306 607 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 MLLT6P55198 1093 aaPredicted RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 CTBP1Q13363 440 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 ZNF460Q14592 562 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 TRIP4Q15650 581 aaPredicted RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 CFAP157Q5JU67 520 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 LINC00523Q86TU6 105 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 AUTS2Q8WXX7 1259 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 HERC2P3Q9BVR0 1158 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 SPATA16Q9BXB7 569 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 MMADHCQ9H3L0 296 aaPredicted RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 NMRAL1Q9HBL8 299 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 SPG21Q9NZD8 308 aa14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 AAR2Q9Y312 384 aaKnown RBP14.02□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC12A8A0AV02 714 aa14.01□□□□□ -0.17
PTCHD3-201ENST00000438700 HSPA4LO95757 839 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms