RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 ELAVL3Q14576 367 aaKnown RBP8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 NR0B2Q15466 257 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 CDKN3Q16667 212 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 POM121L1PQ3SYA9 428 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 PIK3R6Q5UE93 754 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 MFN1Q8IWA4 741 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 STK40Q8N2I9 435 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 RNF139Q8WU17 664 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 TAF4BQ92750 862 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 CALN1Q9BXU9 219 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 FGFBP2Q9BYJ0 223 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 STRADBQ9C0K7 418 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 KLHL25Q9H0H3 589 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 AKTIPQ9H8T0 292 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 NOP53Q9NZM5 478 aaKnown RBP8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 TUBD1Q9UJT1 453 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
R3HDM1-208ENST00000438014 TRAV20A0A0B4J274 112 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 H3BQV1 296 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 TPP1O14773 563 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 NVLO15381 856 aaKnown RBP8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 SLC31A1O15431 190 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 RTN2O75298 545 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 AKT2P31751 481 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 UGT1A5P35504 534 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 SLC11A2P49281 568 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 CYP2J2P51589 502 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 SLC8A3P57103 927 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 RNF4P78317 190 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 ECT2LQ008S8 904 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 CCDC15Q0P6D6 951 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 SPIDRQ14159 915 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 CLCA4Q14CN2 919 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 TGIF1Q15583 401 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 NEK5Q6P3R8 708 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 GUSBP11Q6P575 273 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 RAB11FIP2Q7L804 512 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 UNC45BQ8IWX7 931 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 TMEM145Q8NBT3 493 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 LRRN4CLQ8ND94 238 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 PTPRN2Q92932 1015 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 NAT6Q93015 286 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 FAM131CQ96AQ9 280 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 EPSTI1Q96J88 318 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 LMLNQ96KR4 655 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 SPAG5Q96R06 1193 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 DDX50Q9BQ39 737 aaKnown RBP8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 AARSD1Q9BTE6 412 aaKnown RBP8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 PREBQ9HCU5 417 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 AGPAT3Q9NRZ7 376 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 DNAJC28Q9NX36 388 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 CA5BQ9Y2D0 317 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 USP9YO00507 2555 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 ITIH6Q6UXX5 1313 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
R3HDM1-208ENST00000438014 TLN1Q9Y490 2541 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 FLNCQ14315 2725 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 PMS2P1A4D2B8 440 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 C1QTNF3-AMACRE9PGA6 284 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CLIC2O15247 247 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 EIF3DO15371 548 aaKnown RBP eCLIP8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 NEBLO76041 1014 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 ALX3O95076 343 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 ZBED1O96006 694 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 C4BPAP04003 597 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 JMJD7P0C870 316 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 L1CAMP32004 1257 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 DRD3P35462 400 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 PREPP48147 710 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 KCNAB2Q13303 367 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 C21orf62-AS1Q17RA5 79 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 PITRM1Q5JRX3 1037 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 BORAQ6PGQ7 559 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CCDC73Q6ZRK6 1079 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CARNMT1Q8N4J0 409 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 HJURPQ8NCD3 748 aaPredicted RBP8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 DNAJB8Q8NHS0 232 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 WFDC5Q8TCV5 224 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 OR8D1Q8WZ84 308 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 AZIN2Q96A70 460 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 KREMEN1Q96MU8 473 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 IL12RB2Q99665 862 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 MIPEPQ99797 713 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 FUCA2Q9BTY2 467 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 DHRS4Q9BTZ2 278 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 LRRC27Q9C0I9 530 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CYP3A43Q9HB55 503 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 EPB41L5Q9HCM4 733 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CHMP5Q9NZZ3 219 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 CGNQ9P2M7 1197 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 HMGXB4Q9UGU5 601 aa8.5□□□□□ -1.05
R3HDM1-208ENST00000438014 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms