RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 KCT2Q8NC54 265 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 TNIP2Q8NFZ5 429 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 OSCP1Q8WVF1 389 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 FGF14Q92915 247 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 EXOC4Q96A65 974 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 OTUB2Q96DC9 234 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 PGAP3Q96FM1 320 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 BTN2A3PQ96KV6 586 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 FCRL2Q96LA5 508 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 DESI2Q9BSY9 194 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 TKTL2Q9H0I9 626 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 RABEP2Q9H5N1 569 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 CYP8B1Q9UNU6 501 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 CCL26Q9Y258 94 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 WNT6Q9Y6F9 365 aa6.33□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF638Q14966 1978 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 BTNL10A8MVZ5 291 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 F5H5T6 163 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PJA2O43164 708 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 BUB1O43683 1085 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SPOPO43791 374 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 KLHL41O60662 606 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PROSCO94903 275 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 ENDOD1O94919 500 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 RASGRP1O95267 797 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 IGLV3-25P01717 112 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SRFP11831 508 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 GJC1P36383 396 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC1A1P43005 524 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 CXCR3P49682 368 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 ST13P50502 369 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 MNAT1P51948 309 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 AIF1P55008 147 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PITX1P78337 314 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 GAD2Q05329 585 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 FCHO2Q0JRZ9 810 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 RUNX3Q13761 415 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 ANO4Q32M45 955 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 MPPE1Q53F39 396 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 RABGAP1LQ5R372 815 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 RAP1GAP2Q684P5 730 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 TRNP1Q6NT89 227 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 KIAA0907Q7Z7F0 614 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 NLRP14Q86W24 1093 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 CHSY1Q86X52 802 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM131BQ86XD5 332 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 BBS7Q8IWZ6 715 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC7A5P1Q8MH63 180 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SYCE1Q8N0S2 351 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 TAB3Q8N5C8 712 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 NT5C3BQ969T7 300 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 AZIN2Q96A70 460 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 THOC1Q96FV9 657 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 XPO6Q96QU8 1125 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 RPP25Q9BUL9 199 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PLA2G2FQ9BZM2 168 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SIK2Q9H0K1 926 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 TMEM165Q9HC07 324 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PAPOLBQ9NRJ5 636 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 PIGVQ9NUD9 493 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SPATS2LQ9NUQ6 558 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 ARHGEF38Q9NXL2 777 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 IL20Q9NYY1 176 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 FBXL21Q9UKT6 434 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 AGO1Q9UL18 857 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 GUCA1BQ9UMX6 200 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 JRKLQ9Y4A0 524 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 DENND4AQ7Z401 1863 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 NOTCH4Q99466 2003 aa6.32□□□□□ -1.4
ECHDC1-208ENST00000436638 MACROD2A1Z1Q3 448 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 GOLGA6L9A6NEM1 432 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DAPK3O43293 454 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TSPAN3O60637 253 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DIAPH2O60879 1101 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 IGLV3-27P01718 113 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KLKB1P03952 638 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KRT7P08729 469 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RPSAP08865 295 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ARSAP15289 507 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TACR2P21452 398 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 MSNP26038 577 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 MIPP30301 263 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ADRA1BP35368 520 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 PCK1P35558 622 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KRT20P35900 424 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 SKIV2L2P42285 1042 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 HTR3AP46098 478 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 CD97P48960 835 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 NEK2P51955 445 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 NEK3P51956 506 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ATXN1P54253 815 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms