RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ATMQ13315 3056 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CHD5Q8TDI0 1954 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FLNBO75369 2602 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZSCAN5CA6NGD5 496 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 KRIT1O00522 736 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TOR1BO14657 336 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EPHB6O15197 1021 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CASC3O15234 703 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 KDELR3O43731 214 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 POP4O95707 220 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EEF1GP26641 437 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CFHR1Q03591 330 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PTK2BQ14289 1009 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 HSP90AA4PQ58FG1 418 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PRRT3Q5FWE3 981 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C3orf38Q5JPI3 329 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ATXN7L2Q5T6C5 722 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 BROXQ5VW32 411 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GDPD4Q6W3E5 623 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TRIM72Q6ZMU5 477 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RTL3Q8N8U3 475 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 WDR48Q8TAF3 677 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CASKIN2Q8WXE0 1202 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GDAP1L1Q96MZ0 367 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 KLHL32Q96NJ5 620 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EPAS1Q99814 870 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C11orf70Q9BRQ4 267 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TTYH3Q9C0H2 523 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ABCG4Q9H172 646 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MBNL1Q9NR56 388 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SAMSN1Q9NSI8 373 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CPED1A4D0V7 1026 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CAPN8A6NHC0 703 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 WASH4PA8MWX3 477 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 K7ENP7 123 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NEMP1O14524 444 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 MUSKO15146 869 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KLK10O43240 276 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TM7SF2O76062 418 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 GFPT2O94808 682 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ZIC2O95409 532 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 GJB6O95452 261 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CELA2BP08218 269 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ITGA2BP08514 1039 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TSHRP16473 764 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SOX5P35711 763 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KLK7P49862 253 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 THOP1P52888 689 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 AGERQ15109 404 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 IRF4Q15306 451 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TMEM52BQ4KMG9 183 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 INO80DQ53TQ3 878 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ARHGAP40Q5TG30 622 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 MON1BQ7L1V2 547 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ARL10Q8N8L6 244 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 C3orf20Q8ND61 904 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SLC30A5Q8TAD4 765 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 FAM172AQ8WUF8 416 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LIN37Q96GY3 246 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PCDHB18PQ96TA0 734 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCDC3Q9BQI4 270 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 C1QTNF7Q9BXJ2 289 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CPEB1Q9BZB8 566 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SEMA4CQ9C0C4 833 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KLC2Q9H0B6 622 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PDFQ9HBH1 243 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 IPO11Q9UI26 975 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 DACH1Q9UI36 760 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 DAAM1Q9Y4D1 1078 aa11.08□□□□□ -0.64
SPTLC1P4-201ENST00000435997 COL6A6A6NMZ7 2263 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 YY2O15391 372 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 BUB1O43683 1085 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 MMP20O60882 483 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 IGSF6O95976 241 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TIMP2P16035 220 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RFC1P35251 1148 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 EIF4A3P38919 411 aaKnown RBP11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RPIAP49247 311 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PEX5P50542 639 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SUOXP51687 545 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 HK3P52790 923 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 YBEYP58557 167 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CLN3Q13286 438 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 C1orf61Q13536 156 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ALG11Q2TAA5 492 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KLHL40Q2TBA0 621 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PARP15Q460N3 678 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms