RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PLK1P53350 603 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 HERC3Q15034 1050 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 ARTNQ5T4W7 220 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 BTBD8Q5XKL5 378 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 GK5Q6ZS86 529 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 METTL23Q86XA0 190 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 LILRA2Q8N149 483 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 OLFM1Q99784 485 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 IGSF5Q9NSI5 407 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 CLIC5Q9NZA1 410 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TBC1D30Q9Y2I9 924 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 GIT1Q9Y2X7 761 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TRPV2Q9Y5S1 764 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 MYLKQ15746 1914 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 A0A087X1B8 175 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 C15orf38-AP3S2A0A0A6YYH1 394 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TRPC5OSA6NMA1 111 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 F8W810 466 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 FGF10O15520 208 aaPredicted RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 SLC5A3P53794 718 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TTC3P53804 2025 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 WNT3AP56704 352 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 POU4F1Q01851 419 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 SULT2A1Q06520 285 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 ADGRE1Q14246 886 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 BRMS1LQ5PSV4 323 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 RARS2Q5T160 578 aaKnown RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 MANEALQ5VSG8 457 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 FAM219BQ5XKK7 198 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 KIAA0930Q6ICG6 404 aaPredicted RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 ARHGAP18Q8N392 663 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 LZTR1Q8N653 840 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 CEP70Q8NHQ1 597 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 MAELQ96JY0 434 aaKnown RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 KLHL32Q96NJ5 620 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
CD44-209ENST00000433892 ABCC13Q9NSE7 274 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 RIMS3Q9UJD0 308 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 PCDHGB4Q9UN71 923 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 PCDHGB5Q9Y5G0 923 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
CD44-209ENST00000433892 E9PAM4 449 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 KIF3CO14782 793 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 DNAJA2O60884 412 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 ITGB1P05556 798 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 ETS2P15036 469 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PMLP29590 882 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 HOXC13P31276 330 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 GRIK1P39086 918 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 FAM83EQ2M2I3 478 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 SATL1Q86VE3 508 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 SPATA24Q86W54 205 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PCDH20Q8N6Y1 951 aaKnown RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 PHF21BQ96EK2 531 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PKMYT1Q99640 499 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PKP2Q99959 881 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 MRM3Q9HC36 420 aaKnown RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 ADA2Q9NZK5 511 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 IPO11Q9UI26 975 aaKnown RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 SCN4AP35499 1836 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 ACOT8O14734 319 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 BCAS2O75934 225 aaPredicted RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 PGM3O95394 542 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 CCDC166P0CW27 439 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 DNAJB13P59910 316 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 C1QTNF8P60827 252 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 MAXP61244 160 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 ITKQ08881 620 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 TIGD7Q6NT04 549 aaPredicted RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 CD300LGQ6UXG3 332 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 SCD5Q86SK9 330 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 CCDC117Q8IWD4 279 aaPredicted RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 SNX31Q8N9S9 440 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 STON2Q8WXE9 905 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 MRPL1Q9BYD6 325 aaKnown RBP11.9□□□□□ -0.5
CD44-209ENST00000433892 SMOC2Q9H3U7 446 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 NMUR1Q9HB89 426 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 TRPC7Q9HCX4 862 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 UBAP1Q9NZ09 502 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
CD44-209ENST00000433892 HS3ST4Q9Y661 456 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms