RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MAPK11Q15759 364 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OLFML1Q6UWY5 402 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZC3H18Q86VM9 953 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DAW1Q8N136 415 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DCLK2Q8N568 766 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PPM1NQ8N819 430 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRPM4Q8TD43 1214 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CFAP36Q96G28 342 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CNDP2Q96KP4 475 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SUSD3Q96L08 255 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HTATIP2Q9BUP3 242 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 C1QTNF3Q9BXJ4 246 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OSBPL1AQ9BXW6 950 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 UNC93B1Q9H1C4 597 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRPS1Q9UHF7 1281 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DDX39AO00148 427 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 KRT75O95678 551 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OAS1P00973 400 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FAM58BPP0C7Q3 252 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ELK3P41970 407 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SULT1E1P49888 294 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IL2P60568 153 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 C6orf89Q6UWU4 347 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLD5Q8N7P1 536 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OR6J1Q8NGC5 347 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MCOLN3Q8TDD5 553 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 BLOC1S5Q8TDH9 187 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM169Q96HH4 297 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LRFN5Q96NI6 719 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 WDR12Q9GZL7 423 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 POLR2J2Q9GZM3 115 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 POLR2J3Q9H1A7 115 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CLK4Q9HAZ1 481 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 E5RI56 91 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RAD51BO15315 384 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HNRNPA1P09651 372 aaKnown RBP eCLIP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IFI6P09912 130 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ARP10275 920 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CPB1P15086 417 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SLC25A11Q02978 314 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FADDQ13158 208 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MOGSQ13724 837 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 UAP1Q16222 522 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 NLRP8Q86W28 1048 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ARID3BQ8IVW6 561 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 KBTBD2Q8IY47 623 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SKA1Q96BD8 255 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IFT43Q96FT9 208 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PSMB7Q99436 277 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM51Q9BSJ1 452 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SENP6Q9GZR1 1112 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RAVER2Q9HCJ3 691 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DDIT4Q9NX09 232 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TLL2Q9Y6L7 1015 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZFP37Q9Y6Q3 630 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLIN3O60664 434 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IL6P05231 212 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MMP3P08254 477 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CD58P19256 250 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HNF4AP41235 474 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM25Q14258 630 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PTGES3Q15185 160 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HIST2H2ACQ16777 129 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HIST2H2AA3Q6FI13 130 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 GRAMD4Q6IC98 578 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF544Q6NX49 715 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TUBA3EQ6PEY2 450 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 KCNT2Q6UVM3 1135 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 UNC5DQ6UXZ4 953 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FAM71DQ8N9W8 422 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LNX1Q8TBB1 728 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SAMD11Q96NU1 681 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CELF4Q9BZC1 486 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DDX3YO15523 660 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LILRB3O75022 631 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 IGSF6O95976 241 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FGFR4P22455 802 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DPP6P42658 865 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MFSD10Q14728 455 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GOLGA7BQ2TAP0 167 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LDLRAD1Q5T700 205 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 KLHL35Q6PF15 583 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DSTYKQ6XUX3 929 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DENND5BQ6ZUT9 1274 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SPATA19Q7Z5L4 167 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM135Q86UB9 458 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM35AQ86V20 835 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ACER1Q8TDN7 264 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF483Q8TF39 744 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF382Q96SR6 550 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EFCAB11Q9BUY7 163 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 C1orf50Q9BV19 199 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 OXSMQ9NWU1 459 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NINJ2Q9NZG7 142 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PKD2L1Q9P0L9 805 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PRKAG3Q9UGI9 489 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CRYL1Q9Y2S2 319 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GJA3Q9Y6H8 435 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PSMD11O00231 422 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms