RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TFAP2DQ7Z6R9 452 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 ZNF354CQ86Y25 554 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 PLD6Q8N2A8 252 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 C2CD4AQ8NCU7 369 aaPredicted RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 IGSF8Q969P0 613 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 UTP4Q969X6 686 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 ATXN7L3BQ96GX2 97 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 ZNF778Q96MU6 729 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 NKX2-4Q9H2Z4 354 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 CRISPLD1Q9H336 500 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 MMADHCQ9H3L0 296 aaPredicted RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 MTRRQ9UBK8 725 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 RUVBL2Q9Y230 463 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 NYNRINQ9P2P1 1898 aaKnown RBP12.96□□□□□ -0.34
DDX56-204ENST00000431640 DOCK4Q8N1I0 1966 aa12.96□□□□□ -0.34
DDX56-204ENST00000431640 A0A087X1B8 175 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CAPN14A8MX76 684 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 C5orf67F2Z3F1 127 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 G3V2L1 256 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 J3KR12 359 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 GSC2O15499 205 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 ITM2AO43736 263 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 EPOP01588 193 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
DDX56-204ENST00000431640 ALOX15P16050 662 aaPredicted RBP12.95□□□□□ -0.34
DDX56-204ENST00000431640 STMN1P16949 149 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CD151P48509 253 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 SLC11A2P49281 568 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 SLC12A2P55011 1212 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 RAB10P61026 200 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 POU4F1Q01851 419 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 DSG1Q02413 1049 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 SLC10A7Q0GE19 358 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 ITGA9Q13797 1035 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 LBRQ14739 615 aaKnown RBP12.95□□□□□ -0.34
DDX56-204ENST00000431640 CNGA3Q16281 694 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TSTD2Q5T7W7 516 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 NEPROQ6NW34 567 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 KLHDC10Q6PID8 442 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 GALNT7Q86SF2 657 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TMPRSS6Q8IU80 811 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TDHQ8IZJ6 230 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CFAP61Q8NHU2 1237 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 PEX13Q92968 403 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 PSMG2Q969U7 264 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TADA1Q96BN2 335 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
DDX56-204ENST00000431640 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
DDX56-204ENST00000431640 NMUR2Q9GZQ4 415 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 MAGEH1Q9H213 219 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TASP1Q9H6P5 420 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CAB39LQ9H9S4 337 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 CD248Q9HCU0 757 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 OXSMQ9NWU1 459 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 ZNF212Q9UDV6 495 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 TAGLN3Q9UI15 199 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 NUMBLQ9Y6R0 609 aa12.95□□□□□ -0.34
DDX56-204ENST00000431640 FAM95CA0A1B0GW59 222 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 GOLGA8TH3BQL2 631 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 GRM6O15303 877 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ACSL4O60488 711 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 PRAMEF11O60813 436 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 LILRB3O75022 631 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SOAT2O75908 522 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 HSPA4LO95757 839 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 HMBSP08397 361 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 PPM1AP35813 382 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CD86P42081 329 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ERVFC1P60507 584 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 SLC14A2Q15849 920 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 PCSK7Q16549 785 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 HSF5Q4G112 596 aaPredicted RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 WLSQ5T9L3 541 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 TMCO4Q5TGY1 634 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ZYG11AQ6WRX3 759 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ALYREFQ86V81 257 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 TSPAN17Q96FV3 270 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SORT1Q99523 831 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CCDC106Q9BWC9 280 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 POLR1EQ9GZS1 481 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 ZNF358Q9NW07 568 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 FBXO5Q9UKT4 447 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 LOC285095A0A1B0GVY8 99 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 C2orf71A6NGG8 1288 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SPECC1L-ADORA2AF8WAN1 911 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SLC7A4O43246 635 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 LYPLA1O75608 230 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms