RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PLPP6Q8IY26 295 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 TBC1D3Q8IZP1 549 aaPredicted RBP15.42■□□□□ 0.06
PTCD1-204ENST00000430982 DNASE2BQ8WZ79 361 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 RAPGEF5Q92565 580 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 BIRC7Q96CA5 298 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 CRELD1Q96HD1 420 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 EXOC2Q96KP1 924 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 ZNF670Q9BS34 389 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 LHX3Q9UBR4 397 aa15.42■□□□□ 0.06
PTCD1-204ENST00000430982 BUB1BO60566 1050 aaPredicted RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 PALMO75781 387 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 POP4O95707 220 aaKnown RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 KRT1P04264 644 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 KDELR1P24390 212 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 NAP1L1P55209 391 aaKnown RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 RAD51Q06609 339 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 IL10RBQ08334 325 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 CCDC15Q0P6D6 951 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 ANKRD20A8PQ5CZ79 823 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 PIP5KL1Q5T9C9 394 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 ERN2Q76MJ5 926 aaKnown RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 TMEM139Q8IV31 216 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 RHOT1Q8IXI2 618 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 ATPAF2Q8N5M1 289 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 GOLPH3Q9H4A6 298 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 REXO2Q9Y3B8 237 aaKnown RBP15.41■□□□□ 0.06
PTCD1-204ENST00000430982 ZNF462Q96JM2 2506 aa15.41■□□□□ 0.06
PTCD1-204ENST00000430982 A0A0A6YYK5 440 aaPredicted RBP15.4■□□□□ 0.06
PTCD1-204ENST00000430982 A0A1B0GTW7 788 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 RCCD1A6NED2 376 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 BCAT2O15382 392 aaPredicted RBP15.4■□□□□ 0.06
PTCD1-204ENST00000430982 PLRG1O43660 514 aaKnown RBP15.4■□□□□ 0.06
PTCD1-204ENST00000430982 MFSD11O43934 449 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 UGT2B4P06133 528 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 IGHV4-34P06331 123 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 ITGB7P26010 798 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 CD27P26842 260 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 HADHBP55084 474 aaKnown RBP15.4■□□□□ 0.06
PTCD1-204ENST00000430982 PPP2CBP62714 309 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 PPP2CAP67775 309 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 LRRC38Q5VT99 294 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 NCBP2-AS2Q69YL0 99 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 FAM131CQ96AQ9 280 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 HDAC8Q9BY41 377 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 PCDHGB2Q9Y5G2 931 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
PTCD1-204ENST00000430982 INSIG1O15503 277 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 PRB1P04280 392 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 MAT2AP31153 395 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 CCR5P51681 352 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 NEK3P51956 506 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 VAV2P52735 878 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 GSDMDP57764 484 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 TAS2R38P59533 333 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 BNC1Q01954 994 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 CYP4F3Q08477 520 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 RFTN1Q14699 578 aaPredicted RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 PAFAH1B3Q15102 231 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 ZNF805Q5CZA5 627 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 TMCO4Q5TGY1 634 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 FBXL19Q6PCT2 694 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 GDPD4Q6W3E5 623 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 PARS2Q7L3T8 475 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 PQLC3Q8N755 202 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 RNF25Q96BH1 459 aaPredicted RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 FAF2Q96CS3 445 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 KLHL32Q96NJ5 620 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 OSBPL1AQ9BXW6 950 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 MAK16Q9BXY0 300 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 KDM4CQ9H3R0 1056 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 IL21RQ9HBE5 538 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 DDX56Q9NY93 547 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 SEPT3Q9UH03 358 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 SLCO1B1Q9Y6L6 691 aa15.39■□□□□ 0.05
PTCD1-204ENST00000430982 NYNRINQ9P2P1 1898 aaKnown RBP15.39■□□□□ 0.05
PTCD1-204ENST00000430982 CHD5Q8TDI0 1954 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 A0A1W2PPC4 97 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 TRABD2BA6NFA1 517 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 C16orf96A6NNT2 1141 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 ATXN7O15265 892 aaPredicted RBP15.38■□□□□ 0.05
PTCD1-204ENST00000430982 RNGTTO60942 597 aaKnown RBP15.38■□□□□ 0.05
PTCD1-204ENST00000430982 PCDH8O95206 1070 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 ATXN1LP0C7T5 689 aaKnown RBP15.38■□□□□ 0.05
PTCD1-204ENST00000430982 ADRB3P13945 408 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 ZNF235Q14590 738 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 LBRQ14739 615 aaKnown RBP15.38■□□□□ 0.05
PTCD1-204ENST00000430982 C11orf63Q6NUN7 778 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 DAAM2Q86T65 1068 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 PRPF39Q86UA1 669 aaKnown RBP15.38■□□□□ 0.05
PTCD1-204ENST00000430982 RFX6Q8HWS3 928 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 GALNT15Q8N3T1 639 aa15.38■□□□□ 0.05
PTCD1-204ENST00000430982 TSEN2Q8NCE0 465 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms