RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SEC16BQ96JE7 1060 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MAGEB10Q96LZ2 347 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TEKT5Q96M29 485 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLC4A9Q96Q91 983 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZMYND12Q9H0C1 365 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TP63Q9H3D4 680 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MAGEE1Q9HCI5 957 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RAB9BQ9NP90 201 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RTEL1-TNFRSF6BF6WH68 1400 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 H0YIV9 168 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 L7N2F9 121 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UGT1A9O60656 530 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MAGEC1O60732 1142 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HUS1O60921 280 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SPAG7O75391 227 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TOM1L1O75674 476 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLITRK3O94933 977 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 AP2A1O95782 977 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 IGHEP01854 428 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCCBP05166 539 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DHRS4L1P0CG22 281 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HNRNPLP14866 589 aaKnown RBP eCLIP5.41□□□□□ -1.542e-7■■■□□ 15.2
PTPN4-203ENST00000430976 CYP2B6P20813 491 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ARL3P36405 182 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HUNKP57058 714 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ARHGAP8P85298 464 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ITGADQ13349 1161 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 KPNB1Q14974 876 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCBP1Q15365 356 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NEDD8Q15843 81 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 AANATQ16613 207 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HYAL4Q2M3T9 481 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PAN3Q58A45 887 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TNFAIP8L3Q5GJ75 292 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C19orf35Q6ZS72 473 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PTCHD4Q6ZW05 846 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PIWIL4Q7Z3Z4 852 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ULK2Q8IYT8 1036 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CCDC197Q8NCU1 140 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GALNT11Q8NCW6 608 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GMCL1P1Q8NEA9 526 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 OR2L5Q8NG80 312 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 OR5H6Q8NGV6 325 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SEC14L1Q92503 715 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 JADE3Q92613 823 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FAM111AQ96PZ2 611 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ABHD1Q96SE0 405 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FAM118BQ9BPY3 351 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 LGR4Q9BXB1 951 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 VIPAS39Q9H9C1 493 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UGT1A7Q9HAW7 530 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UGT1A10Q9HAW8 530 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UGT1A8Q9HAW9 530 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CD209Q9NNX6 404 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCDHB16Q9NRJ7 776 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MAP10Q9P2G4 905 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 LIMA1Q9UHB6 759 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NOCTQ9UK39 431 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCDHB11Q9Y5F2 797 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCDHGA5Q9Y5G8 931 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 LOC102724200A0A096LPH7 203 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 KPNA7A9QM74 516 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 IPO13O94829 963 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UQCRFS1P1P0C7P4 283 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RORAP35398 523 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CYLC1P35663 651 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PAFAH1B1P43034 410 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CPA2P48052 419 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RPIAP49247 311 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ALDH5A1P51649 535 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 IL2P60568 153 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TLE2Q04725 743 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DMWDQ09019 674 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PMS2P3Q13401 168 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLC9A3R2Q15599 337 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DPYSL2Q16555 572 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CYP27C1Q4G0S4 372 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C5orf46Q6UWT4 87 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C11orf57Q6ZUT1 292 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF781Q8N8C0 355 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RCBTB1Q8NDN9 531 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CPEB3Q8NE35 698 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF507Q8TCN5 953 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CSGALNACT1Q8TDX6 532 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PIGOQ8TEQ8 1089 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PIK3R3Q92569 461 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF764Q96H86 408 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZDHHC15Q96MV8 337 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLC25A23Q9BV35 468 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RC3H2Q9HBD1 1191 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TAS2R10Q9NYW0 307 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TAS2R7Q9NYW3 318 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 LEF1Q9UJU2 399 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SARDHQ9UL12 918 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C22orf46C9J442 243 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NEMP1O14524 444 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MED6O75586 246 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms