RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LSMEM2Q8N112 164 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 SLC25A41Q8N5S1 370 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 NUDCD1Q96RS6 583 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 OMDQ99983 421 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 IGSF5Q9NSI5 407 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 CPSF2Q9P2I0 782 aaKnown RBP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 RUVBL2Q9Y230 463 aaKnown RBP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
HOXC4-202ENST00000430889 GBF1Q92538 1859 aa14.08□□□□□ -0.16
HOXC4-202ENST00000430889 A0A087X1B8 175 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TBKBP1A7MCY6 615 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 MATN2O00339 956 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 SLC7A4O43246 635 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 LDB2O43679 373 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 DLX3O60479 287 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 NEBLO76041 1014 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TM7SF2O76062 418 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 HSPA4LO95757 839 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CHRNGP07510 517 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 STMN1P16949 149 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 GLDCP23378 1020 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 SLC6A4P31645 630 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 GCKP35557 465 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 KCNQ1P51787 676 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CLCN5P51795 746 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 HK2P52789 917 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 PRMT2P55345 433 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 USP4Q13107 963 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 SEPT6Q14141 434 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 RCN2Q14257 317 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 LBRQ14739 615 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TSNAXIP1Q2TAA8 658 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CNSTQ6PJW8 725 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 KDELC2Q7Z4H8 507 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 GIPC2Q8TF65 315 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 WDR60Q8WVS4 1066 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 NXNL1Q96CM4 212 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF599Q96NL3 588 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 MFSD1Q9H3U5 465 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 COG4Q9H9E3 785 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 XPR1Q9UBH6 696 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 RAP2CQ9Y3L5 183 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 LTBP2Q14767 1821 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 KIAA1671Q9BY89 1806 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 ACSL4O60488 711 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 MPSTP25325 297 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 PGM1P36871 562 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 GRIA4P48058 902 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 ARSDP51689 593 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 KPNB1Q14974 876 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 DNAL1Q4LDG9 190 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 SLC9B1Q4ZJI4 515 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CILP2Q8IUL8 1156 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 LRRC43Q8N309 656 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TDRD5Q8NAT2 981 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 SREK1Q8WXA9 508 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 PEX13Q92968 403 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 MCUR1Q96AQ8 359 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 FEM1CQ96JP0 617 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 CDK5RAP1Q96SZ6 601 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 OLFM1Q99784 485 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 TACO1Q9BSH4 297 aaKnown RBP14.07□□□□□ -0.16
HOXC4-202ENST00000430889 DCLRE1BQ9H816 532 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 RIMKLBQ9ULI2 386 aa14.07□□□□□ -0.16
HOXC4-202ENST00000430889 OBSL1O75147 1896 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 GRID2O43424 1007 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 ZBTB14O43829 449 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 GJB3O75712 270 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 EPOP01588 193 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 HMGA1P17096 107 aaKnown RBP14.06□□□□□ -0.16
HOXC4-202ENST00000430889 PRDX6P30041 224 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 OR1E1P30953 314 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 DNAJB13P59910 316 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 KDSRQ06136 332 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 BTKQ06187 659 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 TECRLQ5HYJ1 363 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 METTL21CQ5VZV1 264 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 LGI2Q8N0V4 545 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 ARHGAP24Q8N264 748 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 OR52K2Q8NGK3 314 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 MOCOSQ96EN8 888 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms