RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ATPAF2Q8N5M1 289 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
HDAC6-207ENST00000430858 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 KLK6Q92876 244 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 KLHDC7BQ96G42 594 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 CAMK1GQ96NX5 476 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 LENG8Q96PV6 779 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-207ENST00000430858 PSKH2Q96QS6 385 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 CDC6Q99741 560 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 C1QTNF2Q9BXJ5 285 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 CALN1Q9BXU9 219 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 SLC17A9Q9BYT1 436 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 ATP13A3Q9H7F0 1226 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 ANGPTL2Q9UKU9 493 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 HS3ST3A1Q9Y663 406 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 WDR87Q6ZQQ6 2873 aa9.93□□□□□ -0.82
HDAC6-207ENST00000430858 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SPAARA0A1B0GVQ0 90 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 TSPAN11A1L157 253 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 IGLON5A6NGN9 336 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 A6NNZ2 444 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 TMEM110-MUSTN1A8MSY1 372 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 MAFKO60675 156 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 TRIM16O95361 564 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 PEX11BO96011 259 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 PAK4O96013 591 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ITGAVP06756 1048 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 THEGLP0DJG4 465 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 TIMP2P16035 220 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SERPINA4P29622 427 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SLC1A1P43005 524 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 GRK6P43250 576 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 RGRP47804 291 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 RXRGP48443 463 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 TAS2R40P59535 323 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 AP1S1P61966 158 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SHC2P98077 582 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 BCL2L1Q07817 233 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ELP6Q0PNE2 266 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 FGL2Q14314 439 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 PAFAH1B3Q15102 231 aaKnown RBP9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SHBQ15464 509 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 UGP2Q16851 508 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ANKRD20A8PQ5CZ79 823 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ZFYVE27Q5T4F4 411 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 NCBP2-AS2Q69YL0 99 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ABI3BPQ7Z7G0 1075 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SRLQ86TD4 932 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
HDAC6-207ENST00000430858 CPNE8Q86YQ8 564 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 DCP2Q8IU60 420 aaKnown RBP9.92□□□□□ -0.82
HDAC6-207ENST00000430858 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 PCDH19Q8TAB3 1148 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 CXorf40AQ8TE69 158 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 RHBDD1Q8TEB9 315 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 FAF2Q96CS3 445 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 MYOCQ99972 504 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 C1QTNF7Q9BXJ2 289 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 FZD3Q9NPG1 666 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 ITM2BQ9Y287 266 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
HDAC6-207ENST00000430858 CNOT1A5YKK6 2376 aaKnown RBP9.92□□□□□ -0.82
HDAC6-207ENST00000430858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 A0A1W2PQ67 120 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 ZNF487B1APH4 448 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 FPGTO14772 594 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 SPINT1O43278 529 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 BUB1BO60566 1050 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 TM7SF2O76062 418 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 LCA5LO95447 670 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 KDELR1P24390 212 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 EPHA8P29322 1005 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 CYLC1P35663 651 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 GARSP41250 739 aaKnown RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 MAGEA1P43355 309 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 RABIFP47224 123 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 SCNN1BP51168 640 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 CLDN2P57739 230 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 POLR2LP62875 67 aaKnown RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 FAM193AP78312 1265 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 IL9RQ01113 521 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 SLC10A7Q0GE19 358 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 GALNT2Q10471 571 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 ZNF235Q14590 738 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 SPA17Q15506 151 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 TMEM52BQ4KMG9 183 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 RALGPS1Q5JS13 557 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 PRAMEF14Q5SWL7 426 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 MARC1Q5VT66 337 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 LRRC38Q5VT99 294 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 TIGD7Q6NT04 549 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 ERAP2Q6P179 960 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 KYAT3Q6YP21 454 aaKnown RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 GCNT7Q6ZNI0 430 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 GAS2L3Q86XJ1 694 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 VSIG1Q86XK7 387 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms