RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ABHD14A-ACY1A0A1B0GW23 586 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 SLC35G4P0C7Q5 338 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 ZNF844Q08AG5 666 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 MAMLD1Q13495 774 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 TSC22D1Q15714 1073 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 PTPRNQ16849 979 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 PPP1R26Q5T8A7 1209 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 NELL1Q92832 810 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 EMID1Q96A84 441 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 URADA6NGE7 173 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 STX11O75558 287 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 GNRH1P01148 92 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 ADRB2P07550 413 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 BUD31P41223 144 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 IL12RB1P42701 662 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 PPP3CAQ08209 521 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 KYAT3Q6YP21 454 aaKnown RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 HJURPQ8NCD3 748 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 KCTD4Q8WVF5 259 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 C1orf50Q9BV19 199 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 CMTM6Q9NX76 183 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 VPS4AQ9UN37 437 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 MFN2O95140 757 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 TFEBP19484 476 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 ADSLP30566 484 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 SMAD3P84022 425 aaKnown RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 KLHL12Q53G59 568 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 C8orf59Q8N0T1 100 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-206ENST00000429895 TMEM134Q9H6X4 195 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 SLC35C2Q9NQQ7 365 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 PTGFRNQ9P2B2 879 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 ASF1AQ9Y294 204 aa15.51■□□□□ 0.07
PTPRF-206ENST00000429895 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 A0A087X0B3 334 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 SIGLEC16A6NMB1 481 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 SLC25A14O95258 325 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ECDO95905 644 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 DNTTP04053 509 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 GOT1P17174 413 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 TTPAP49638 278 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 DEF8Q6ZN54 512 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PAGE2Q7Z2X7 111 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PIGZQ86VD9 579 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 COQ7Q99807 217 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 IMP3Q9NV31 184 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 GSTK1Q9Y2Q3 226 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ASTN2O75129 1339 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 RCVRNP35243 200 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 GRIA3P42263 894 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 WASHC2DQ5SRD0 308 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 DUSP9Q99956 384 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 MAGEC1O60732 1142 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 FKTNO75072 461 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 LINC00032P0C843 101 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ALADP13716 330 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ILF2Q12905 390 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 DEFB115Q30KQ5 88 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ATP13A4Q4VNC1 1196 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 CFAP52Q8N1V2 620 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PARP8Q8N3A8 854 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 EEF1AKMT1Q8WVE0 214 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 TTLL2Q9BWV7 592 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 SUCOQ9UBS9 1254 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 TRBV23OR9-2A0A075B6M9 112 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 WASP42768 502 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 GRIA4P48058 902 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PSMD4P55036 377 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ZNF549Q6P9A3 640 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 KRT74Q7RTS7 529 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 UNC93AQ86WB7 457 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 KAZALD1Q96I82 304 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 NEUROD4Q9HD90 331 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 CLN6Q9NWW5 311 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 C15orf38-AP3S2A0A0A6YYH1 394 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 KPNA5O15131 536 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 MSCO60682 206 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 GABRR2P28476 465 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 EIF2B2P49770 351 aaKnown RBP15.5■□□□□ 0.07
PTPRF-206ENST00000429895 PSMD7P51665 324 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 NAGLUP54802 743 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ARPINQ7Z6K5 226 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 OR4A15Q8NGL6 344 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 ZNF780BQ9Y6R6 833 aa15.5■□□□□ 0.07
PTPRF-206ENST00000429895 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 CHADO15335 359 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 ITPKBP27987 946 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 SPIBQ01892 262 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 KCTD21Q4G0X4 260 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 HIPK1Q86Z02 1210 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 NUAK2Q9H093 628 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 IKZF3Q9UKT9 509 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 FAM237BA0A1B0GVD1 139 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 TNFAIP8O95379 198 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 FAM46CQ5VWP2 391 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 MZT2AQ6P582 158 aa15.49■□□□□ 0.07
PTPRF-206ENST00000429895 ZNF304Q9HCX3 659 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms