RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 C1QTNF3-AMACRE9PGA6 284 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 KPNA3O00505 521 aaPredicted RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ALOX15BO15296 676 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 DCXO43602 365 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 SOCS5O75159 536 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CPP00450 1065 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 AGTP01019 485 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 PRNPP04156 253 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 TPSB2P20231 275 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 IVDP26440 423 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 MAGEA6P43360 314 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CARSP49589 748 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 EPHB1P54762 984 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 DRG2P55039 364 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ARL4CP56559 192 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 STARD6P59095 220 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 MRPS21P82921 87 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 SARNPP82979 210 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZXDAP98168 799 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CDK16Q00536 496 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CAV1Q03135 178 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CDK18Q07002 472 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 MTM1Q13496 603 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 OLIG2Q13516 323 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ENPP2Q13822 863 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GALNT3Q14435 633 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GRM3Q14832 879 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 TPSAB1Q15661 275 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 HIF1AQ16665 826 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 POM121L1PQ3SYA9 428 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 EOGTQ5NDL2 527 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 C9orf64Q5T6V5 341 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ARMC12Q5T9G4 340 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 NAPEPLDQ6IQ20 393 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 HIBCHQ6NVY1 386 aaPredicted RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZDHHC24Q6UX98 284 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GDPD4Q6W3E5 623 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 LINC00523Q86TU6 105 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CCDC25Q86WR0 208 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CAMK1DQ8IU85 385 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 PLPP6Q8IY26 295 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GSPT2Q8IYD1 628 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 SLC25A41Q8N5S1 370 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GPR161Q8N6U8 529 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 NAT8LQ8N9F0 302 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 DNAAF3Q8N9W5 541 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 SEC14L1Q92503 715 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 FMO2Q99518 471 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 OSBPL1AQ9BXW6 950 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 ADGRE3Q9BY15 652 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 LMAN1LQ9HAT1 526 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 XAB2Q9HCS7 855 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 PRSS16Q9NQE7 514 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 DYRK4Q9NR20 520 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 GDF3Q9NR23 364 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 MTRF1LQ9UGC7 380 aaKnown RBP7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 CHKBQ9Y259 395 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 NCOR1O75376 2440 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 MUC22E2RYF6 1773 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 TCRBV21S2A2A0A5A6 115 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SMAPO00193 183 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ADAM23O75077 832 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 LEFTY1O75610 366 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SUN1O94901 812 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PGLSO95336 258 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 NDST3O95803 873 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 IL1BP01584 269 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SLC4A1P02730 911 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 FGF1P05230 155 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 CTSLP07711 333 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 CHRNB1P11230 501 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 HLA-DPA1P20036 260 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 XPAP23025 273 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 MCM3P25205 808 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 GRIA1P42261 906 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 CHRNA4P43681 627 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SESN2P58004 480 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 VSNL1P62760 191 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SIGLEC14Q08ET2 396 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 CAMK2GQ13555 558 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SEPT6Q14141 434 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 IHHQ14623 411 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 BBS9Q3SYG4 887 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 HSF5Q4G112 596 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 DNAJC21Q5F1R6 531 aaKnown RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ARSIQ5FYB1 569 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SIRPB2Q5JXA9 342 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF776Q68DI1 518 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 KCTD11Q693B1 232 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 KIAA1211LQ6NV74 962 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PKN3Q6P5Z2 889 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms