RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 STK33Q9BYT3 514 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 RETREG1Q9H6L5 497 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 NOL6Q9H6R4 1146 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 THSD1Q9NS62 852 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 EVA1BQ9NVM1 165 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 TMEM248Q9NWD8 314 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 SIRPGQ9P1W8 387 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 GULP1Q9UBP9 304 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 RABGEF1Q9UJ41 708 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 NOCTQ9UK39 431 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 C2CD4BA6NLJ0 364 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 TPP1O14773 563 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 KDELR3O43731 214 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 TMCC1O94876 653 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 LSM8O95777 96 aaKnown RBP16.76■□□□□ 0.27
VARS-216ENST00000428445 GSRP00390 522 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 SDC4P31431 198 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 PDX1P52945 283 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 HDAC4P56524 1084 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 FMO1Q01740 532 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 RBM44Q6ZP01 1051 aaKnown RBP16.76■□□□□ 0.27
VARS-216ENST00000428445 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
VARS-216ENST00000428445 ASB12Q8WXK4 309 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 TTC9Q92623 222 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 RAB7BQ96AH8 199 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 EXOC2Q96KP1 924 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 EPAS1Q99814 870 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 CCDC3Q9BQI4 270 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 MAGEH1Q9H213 219 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 HPCAL4Q9UM19 191 aa16.76■□□□□ 0.27
VARS-216ENST00000428445 EPHB6O15197 1021 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 LZTS3O60299 673 aaPredicted RBP16.75■□□□□ 0.27
VARS-216ENST00000428445 RAMP2O60895 175 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 TM7SF2O76062 418 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 TNFSF15O95150 251 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 PIGNO95427 931 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 CYP1A1P04798 512 aaPredicted RBP16.75■□□□□ 0.27
VARS-216ENST00000428445 ANXA6P08133 673 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 MMP8P22894 467 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
VARS-216ENST00000428445 MAPKAPK2P49137 400 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 RHDQ02161 417 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 NRG1Q02297 640 aaPredicted RBP16.75■□□□□ 0.27
VARS-216ENST00000428445 ARL13BQ3SXY8 428 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 C6orf132Q5T0Z8 1188 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 KCTD16Q68DU8 428 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 RD3Q7Z3Z2 195 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 B3GNT8Q7Z7M8 397 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 MSANTD4Q8NCY6 345 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 DENND6BQ8NEG7 585 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 CXorf40AQ8TE69 158 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 FAM172AQ8WUF8 416 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 BTN2A2Q8WVV5 523 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 TBC1D31Q96DN5 1066 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 DPH1Q9BZG8 443 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 VPS16Q9H269 839 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 GANQ9H2C0 597 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 NLRC4Q9NPP4 1024 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 DACH1Q9UI36 760 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 PADI4Q9UM07 663 aa16.75■□□□□ 0.27
VARS-216ENST00000428445 CDRT15L2A8MXV6 281 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 LMO7DNF2Z398 122 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 PRKCGP05129 697 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
VARS-216ENST00000428445 POLR2FP61218 127 aaKnown RBP16.74■□□□□ 0.27
VARS-216ENST00000428445 SKOR1P84550 965 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 CDR2Q01850 454 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 PPARDQ03181 441 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 PTP4A2Q12974 167 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 SRSF6Q13247 344 aaKnown RBP16.74■□□□□ 0.27
VARS-216ENST00000428445 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 IRF4Q15306 451 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 CYTH1Q15438 398 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 ZSCAN23Q3MJ62 389 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 TCP11X2Q5H9J9 407 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 HID1Q8IV36 788 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 SFTPA2Q8IWL1 248 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 CENPIQ92674 756 aaPredicted RBP16.74■□□□□ 0.27
VARS-216ENST00000428445 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 FOXP3Q9BZS1 431 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 SLC13A1Q9BZW2 595 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 TTYH3Q9C0H2 523 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 SSUH2Q9Y2M2 353 aa16.74■□□□□ 0.27
VARS-216ENST00000428445 ASH1LQ9NR48 2969 aaKnown RBP16.74■□□□□ 0.27
VARS-216ENST00000428445 ANKRD36A6QL64 1941 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 EFSO43281 561 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 HGFP14210 728 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 ETFBP38117 255 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 UCNP55089 124 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 CCL7P80098 99 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 CLN3Q13286 438 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 ALG11Q2TAA5 492 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 WSCD2Q2TBF2 565 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 SCYL2Q6P3W7 929 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 ENPP7Q6UWV6 458 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms