RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 TBATAQ96M53 351 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 ZNF578Q96N58 590 aaPredicted RBP13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 MBNL1Q9NR56 388 aaKnown RBP13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 LHX3Q9UBR4 397 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 IPO11Q9UI26 975 aaKnown RBP13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 FZD10Q9ULW2 581 aa13.22□□□□□ -0.29
DEPDC7-203ENST00000427755 A0A1W2PNU3 283 aaPredicted RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 INSIG1O15503 277 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 USP12O75317 370 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 IGSF6O95976 241 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 PRB1P04280 392 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 LSSP48449 732 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 YBEYP58557 167 aaPredicted RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 RHOAP61586 193 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 YPEL5P62699 121 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 GABREP78334 506 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 OGDHQ02218 1023 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 CYTH1Q15438 398 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 ISXQ2M1V0 245 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 PARP15Q460N3 678 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 VPS36Q86VN1 386 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 PHACTR4Q8IZ21 702 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 UMODL1-AS1Q8N2C9 162 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 NEK11Q8NG66 645 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 BTN2A2Q8WVV5 523 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 MCEEQ96PE7 176 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 EPAS1Q99814 870 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 AGPAT1Q99943 283 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 LRRC61Q9BV99 259 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 BOCQ9BWV1 1114 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 CPEB1Q9BZB8 566 aaKnown RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 ABCG4Q9H172 646 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 ASCL3Q9NQ33 180 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 NCKIPSDQ9NZQ3 722 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
DEPDC7-203ENST00000427755 DOCK4Q8N1I0 1966 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CPED1A4D0V7 1026 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 TOR1BO14657 336 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CASC3O15234 703 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CREB3O43889 395 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 C1QL1O75973 258 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 TM7SF2O76062 418 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 PIGNO95427 931 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 AIF1P55008 147 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 MYL5Q02045 173 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 RAD51Q06609 339 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 C1orf61Q13536 156 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 PTK2BQ14289 1009 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 NCAPHQ15003 741 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 NR0B2Q15466 257 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 PERM1Q5SV97 790 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 SCYL2Q6P3W7 929 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 MACC1Q6ZN28 852 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 SLC35F3Q8IY50 421 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 MCOLN2Q8IZK6 566 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 LSMEM2Q8N112 164 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CXorf40AQ8TE69 158 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 IL12RB2Q99665 862 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 CLPBQ9H078 707 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 LRRC19Q9H756 370 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
DEPDC7-203ENST00000427755 EIF4E1BA6NMX2 242 aaKnown RBP13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 TK2O00142 265 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 TSHRP16473 764 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 THOP1P52888 689 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 ERVPABLB-1P60509 514 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 UBXN1Q04323 297 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 IRF4Q15306 451 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 WSCD2Q2TBF2 565 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 ACAD10Q6JQN1 1059 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 IGF2-ASQ6U949 168 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 PCSK4Q6UW60 755 aa13.19□□□□□ -0.3
DEPDC7-203ENST00000427755 GPR155Q7Z3F1 870 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms