RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 KYAT3Q6YP21 454 aaKnown RBP18.64■□□□□ 0.57
GPC1-205ENST00000427506 ARHGAP12Q8IWW6 846 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 GALNT15Q8N3T1 639 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 NPWQ8N729 165 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 PAF1Q8N7H5 531 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 ZCCHC14Q8WYQ9 949 aaKnown RBP18.64■□□□□ 0.57
GPC1-205ENST00000427506 LENG8Q96PV6 779 aaPredicted RBP18.64■□□□□ 0.57
GPC1-205ENST00000427506 SUV39H2Q9H5I1 410 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 DKK3Q9UBP4 350 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 ZMIZ1Q9ULJ6 1067 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 MYO1FO00160 1098 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 AREL1O15033 823 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 SPINT1O43278 529 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 TM7SF2O76062 418 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 DKK1O94907 266 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 ITIH2P19823 946 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 AMPD1P23109 780 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 EIF4A3P38919 411 aaKnown RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 RABIFP47224 123 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 ELP6Q0PNE2 266 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 TRIM14Q14142 442 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 SPECC1LQ69YQ0 1117 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 TMCO3Q6UWJ1 677 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 DHRS13Q6UX07 377 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 CCNI2Q6ZMN8 369 aaPredicted RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 ARHGAP36Q6ZRI8 547 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 TMPRSS7Q7RTY8 843 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 KANSL1Q7Z3B3 1105 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 SRLQ86TD4 932 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 SLC22A18ASQ8N1D0 253 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 NIPA2Q8N8Q9 360 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 KDF1Q8NAX2 398 aaPredicted RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 ASB12Q8WXK4 309 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 WRAP53Q9BUR4 548 aaKnown RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 C1QTNF7Q9BXJ2 289 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 DEF6Q9H4E7 631 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 ZNHIT6Q9NWK9 470 aaKnown RBP18.63■□□□□ 0.57
GPC1-205ENST00000427506 DNAJC28Q9NX36 388 aa18.63■□□□□ 0.57
GPC1-205ENST00000427506 DOCK9Q9BZ29 2069 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 KRT37O76014 449 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 TPM1P09493 284 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 DGKAP23743 735 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 SUOXP51687 545 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 KRT81Q14533 505 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 RFTN1Q14699 578 aaPredicted RBP18.62■□□□□ 0.57
GPC1-205ENST00000427506 TSR1Q2NL82 804 aaKnown RBP18.62■□□□□ 0.57
GPC1-205ENST00000427506 ZNF542PQ5EBM4 170 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 POLNQ7Z5Q5 900 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 RNF214Q8ND24 703 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 DENND6BQ8NEG7 585 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 OR8K1Q8NGG5 319 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 HCAR2Q8TDS4 363 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 TEKT4Q8WW24 435 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 IFT43Q96FT9 208 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 ZNF641Q96N77 438 aaPredicted RBP18.62■□□□□ 0.57
GPC1-205ENST00000427506 CSPG4P5Q96PW8 444 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 TUBGCP5Q96RT8 1024 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 KLF6Q99612 283 aaPredicted RBP18.62■□□□□ 0.57
GPC1-205ENST00000427506 ATP13A3Q9H7F0 1226 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 CTTNBP2NLQ9P2B4 639 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 PCDHGA1Q9Y5H4 931 aa18.62■□□□□ 0.57
GPC1-205ENST00000427506 CABIN1Q9Y6J0 2220 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 FFAR2O15552 330 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 RFPL3O75679 317 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 SERPINA4P29622 427 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 HNRNPH3P31942 346 aaKnown RBP18.61■□□□□ 0.57
GPC1-205ENST00000427506 RGRP47804 291 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 CSNK1DP48730 415 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 HNRNPKP61978 463 aaKnown RBP eCLIP18.61■□□□□ 0.57
GPC1-205ENST00000427506 PDE1CQ14123 709 aaPredicted RBP18.61■□□□□ 0.57
GPC1-205ENST00000427506 HADHQ16836 314 aaKnown RBP18.61■□□□□ 0.57
GPC1-205ENST00000427506 UGP2Q16851 508 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 ERAP2Q6P179 960 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 BRAT1Q6PJG6 821 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 CAMK1DQ8IU85 385 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 TP53INP2Q8IXH6 220 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 SLC25A45Q8N413 288 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 ZNF564Q8TBZ8 553 aaPredicted RBP18.61■□□□□ 0.57
GPC1-205ENST00000427506 CTNNBL1Q8WYA6 563 aaPredicted RBP18.61■□□□□ 0.57
GPC1-205ENST00000427506 PCDH18Q9HCL0 1135 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 ETNK2Q9NVF9 386 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 UCKL1Q9NWZ5 548 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 CEP295Q9C0D2 2601 aa18.61■□□□□ 0.57
GPC1-205ENST00000427506 COL5A1P20908 1838 aaPredicted RBP18.6■□□□□ 0.57
GPC1-205ENST00000427506 SPTY2D1-AS1A0A0U1RR47 76 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 H3BM21 787 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 BUB1BO60566 1050 aaPredicted RBP18.6■□□□□ 0.57
GPC1-205ENST00000427506 PIAS2O75928 621 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 C1SP09871 688 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 H2AFZP0C0S5 128 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 ALPPL2P10696 532 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 CDK4P11802 303 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 CKMT2P17540 419 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 GJC1P36383 396 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 ACADVLP49748 655 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 SCNN1BP51168 640 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 RENBPP51606 427 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 THOP1P52888 689 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms