RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 ARCQ7LC44 396 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 PQLC1Q8N2U9 271 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 PKP2Q99959 881 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 GJB3O75712 270 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 TPD52P55327 224 aaPredicted RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 TLR1Q15399 786 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 SV2CQ496J9 727 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 IL23RQ5VWK5 629 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 DNAJC14Q6Y2X3 702 aaPredicted RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 DNAJB14Q8TBM8 379 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 FAF1Q9UNN5 650 aaPredicted RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 PPP6CO00743 305 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 DDHD2O94830 711 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 PCNAP12004 261 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 ITGB6P18564 788 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 EFEMP1Q12805 493 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 DDR2Q16832 855 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 FBXL19Q6PCT2 694 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 FRMD8Q9BZ67 464 aaPredicted RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 TMEM30AQ9NV96 361 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 BIRC5O15392 142 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 KCNE1P15382 129 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 TPSB2P20231 275 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 GGT5P36269 586 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CD86P42081 329 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 ACADSBP45954 432 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 STX1BP61266 288 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 TPSAB1Q15661 275 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 LIMS2Q7Z4I7 341 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 HEXDCQ8WVB3 486 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 DUSP16Q9BY84 665 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 TLE6Q9H808 572 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 NCKIPSDQ9NZQ3 722 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 I6L893 689 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 PIRO00625 290 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 DLX3O60479 287 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 CD4P01730 458 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 PYGLP06737 847 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 ME2P23368 584 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CPOXP36551 454 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 LIMK2P53671 638 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CEACAM7Q14002 265 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 PFKFB4Q16877 469 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 GPR158Q5T848 1215 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 ITPRIPL1Q6GPH6 555 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 RMDN1Q96DB5 314 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 MLPHQ9BV36 600 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 UBE2OQ9C0C9 1292 aaKnown RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 ABCG8Q9H221 673 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 Q9H521 79 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 SEMA4BQ9NPR2 832 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CHN2P52757 468 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 CDH17Q12864 832 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 KCTD21Q4G0X4 260 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 TAC4Q86UU9 113 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 OFCC1Q8IZS5 231 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 SMIM14Q96QK8 99 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 C1orf50Q9BV19 199 aa13.5□□□□□ -0.25
USP42-203ENST00000426246 MMADHCQ9H3L0 296 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 FAM124BQ9H5Z6 455 aaPredicted RBP13.5□□□□□ -0.25
USP42-203ENST00000426246 ARHGEF37A1IGU5 675 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 TIMM44O43615 452 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 SETSIPP0DME0 302 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 APLP1P51693 650 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 RAP1GDS1P52306 607 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 NAPEPLDQ6IQ20 393 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 FAM110BQ8TC76 370 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 CNDP1Q96KN2 507 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 SP110Q9HB58 689 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 RGSL1A5PLK6 1076 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 PTGESO14684 152 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 AHCYL1O43865 530 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 NCK1P16333 377 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 KCNA5P22460 613 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 YAP1P46937 504 aaKnown RBP13.49□□□□□ -0.25
USP42-203ENST00000426246 SLC7A2P52569 658 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 GALNT3Q14435 633 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
USP42-203ENST00000426246 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
USP42-203ENST00000426246 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms