RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 GNLYP22749 145 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ABCD3P28288 659 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 HOXD3P31249 432 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 EFNA5P52803 228 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 NUDT6P53370 316 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 CLDN2P57739 230 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 NANOS2P60321 138 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ABATP80404 500 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 FAM27E3Q08E93 113 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 CTTNQ14247 550 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 PPP2R5BQ15173 497 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 SLC9B1Q4ZJI4 515 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ESCO2Q56NI9 601 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 TYW3Q6IPR3 259 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 PATL1Q86TB9 770 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 FJX1Q86VR8 437 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 TDRPQ86YL5 185 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ZDHHC17Q8IUH5 632 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 CCDC105Q8IYK2 499 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 SAMD14Q8IZD0 417 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 PARP16Q8N5Y8 322 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 TEX45Q8NA69 505 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 GJC3Q8NFK1 279 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 B4GALNT2Q8NHY0 566 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 NEUROG1Q92886 237 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ZUFSPQ96AP4 578 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 THOC3Q96J01 351 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 TXNDC15Q96J42 360 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ZNF479Q96JC4 524 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 TBATAQ96M53 351 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 KLHL15Q96M94 604 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 ZPBPQ9BS86 351 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 NTPCRQ9BSD7 190 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 PAIP1Q9H074 479 aaKnown RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 HIPK2Q9H2X6 1198 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 UBN1Q9NPG3 1134 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 C20orf141Q9NUB4 165 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 HCN3Q9P1Z3 774 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 SLC25A10Q9UBX3 287 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-202ENST00000425835 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 NDRG3Q9UGV2 375 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 GJD2Q9UKL4 321 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 PCDHA7Q9UN72 937 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 RAI2Q9Y5P3 530 aa3.32□□□□□ -1.88
HDAC2-202ENST00000425835 CCDC180Q9P1Z9 1646 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 DCAF1Q9Y4B6 1507 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CLSPNQ9HAW4 1339 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 LINC01553A4QN01 128 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 GAGE10A6NGK3 116 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 FAM90A8PA6NJQ4 464 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 KLRF2D3W0D1 207 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 TIMM23O14925 209 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 BCAT2O15382 392 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 NGFRP08138 427 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 FAM90A13PP0C7W8 464 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 FAM90A24PP0C7X0 464 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 T-ENOLP0DO92 83 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 PCNAP12004 261 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 COX7A2P14406 83 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 PTPN2P17706 415 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 SRD5A1P18405 259 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ITGB8P26012 769 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 C21orf33P30042 268 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 PIGAP37287 484 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 RPL3P39023 403 aaKnown RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 HARS2P49590 506 aaKnown RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CXCR3P49682 368 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CTCFP49711 727 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 THBS3P49746 956 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 RGS19P49795 217 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CRYZQ08257 329 aaKnown RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 NEXNQ0ZGT2 675 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 G3BP1Q13283 466 aaKnown RBP eCLIP3.31□□□□□ -1.882e-9■■■□□ 18.4
HDAC2-202ENST00000425835 ITGADQ13349 1161 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 SLC4A8Q2Y0W8 1093 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CNTROBQ8N137 903 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 C9orf106Q8NAJ2 232 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 C11orf65Q8NCR3 313 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ZMIZ2Q8NF64 920 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ARRDC2Q8TBH0 407 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ZCCHC10Q8TBK6 192 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 TMEM163Q8TC26 289 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 KLHL29Q96CT2 875 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 SEC62Q99442 399 aaKnown RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 MXRA8Q9BRK3 442 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 TMEM204Q9BSN7 226 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ANP32EQ9BTT0 268 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CLK4Q9HAZ1 481 aaKnown RBP3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CYSLTR2Q9NS75 346 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 ANKRD10Q9NXR5 420 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 IL36RNQ9UBH0 155 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CARD8Q9Y2G2 431 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 FAM96BQ9Y3D0 163 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 CYP46A1Q9Y6A2 500 aa3.31□□□□□ -1.88
HDAC2-202ENST00000425835 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
HDAC2-202ENST00000425835 LDLRAD4O15165 306 aa3.3□□□□□ -1.88
HDAC2-202ENST00000425835 SMAD6O43541 496 aaKnown RBP3.3□□□□□ -1.88
HDAC2-202ENST00000425835 PRSS2P07478 247 aa3.3□□□□□ -1.88
HDAC2-202ENST00000425835 HOXC6P09630 235 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms