RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TMED1Q13445 227 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 IKBKEQ14164 716 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TBC1D25Q3MII6 688 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CLEC6AQ6EIG7 209 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PIWIL4Q7Z3Z4 852 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 LCA5Q86VQ0 697 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ANKRD13AQ8IZ07 590 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 RYBPQ8N488 228 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 NTAN1Q96AB6 310 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ASB9Q96DX5 294 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 VAT1Q99536 393 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 MRPL57Q9BQC6 102 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM30AQ9NV96 361 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ARHGEF38Q9NXL2 777 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CACNA2D2Q9NY47 1150 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 FBXO5Q9UKT4 447 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PHF24Q9UPV7 400 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 COL1A2P08123 1366 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SAC3D1A6NKF1 404 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 C9JVG2 144 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 MRASO14807 208 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 MMP3P08254 477 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 WARSP23381 471 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 GALK1P51570 392 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 HK2P52789 917 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SULT2A1Q06520 285 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 GEN1Q17RS7 908 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FAM83EQ2M2I3 478 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF789Q5FWF6 425 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 REP15Q6BDI9 236 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 NEPROQ6NW34 567 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 LDB1Q86U70 411 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CUZD1Q86UP6 607 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 ATPAF2Q8N5M1 289 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 KCTD13Q8WZ19 329 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 PCED1BQ96HM7 432 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SENP8Q96LD8 212 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 MCMBPQ9BTE3 642 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 BRD8Q9H0E9 1235 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 OSBPL2Q9H1P3 480 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FBRSL1Q9HCM7 1045 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 RBM22Q9NW64 420 aaKnown RBP eCLIP7.59□□□□□ -1.196e-9■■■■■ 32.5
SMARCC1-202ENST00000425518 AAR2Q9Y312 384 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 PLOD2O00469 737 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CCL22O00626 93 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FBP2O00757 339 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SUPT7LO94864 414 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SNRPB2P08579 225 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CCDC166P0CW27 439 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CDK4P11802 303 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 COL6A2P12110 1019 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 GRIA3P42263 894 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC7A2P52569 658 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CDH13P55290 713 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 RHDQ02161 417 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 PLOD1Q02809 727 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 ITKQ08881 620 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 RFTN1Q14699 578 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 BNIPLQ7Z465 357 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 HAUS8Q9BT25 410 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 VTA1Q9NP79 307 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 PLK2Q9NYY3 685 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CROTQ9UKG9 612 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 NUDT5Q9UKK9 219 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 IPPQ9Y573 584 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CITO14578 2027 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SNAI1O95863 264 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 MOCS2O96007 188 aaPredicted RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CPB1P15086 417 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 ARNTP27540 789 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FRG1Q14331 258 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 KIF19Q2TAC6 998 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 PRAMEF19Q5SWL8 479 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 BTBD8Q5XKL5 378 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 LPCAT2Q7L5N7 544 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM126BQ8IUX1 230 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 AFAP1L2Q8N4X5 818 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 TOP6BLQ8N6T0 577 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 ZMIZ2Q8NF64 920 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 GPRC5AQ8NFJ5 357 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 OR6P1Q8NGX9 317 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 EFHD1Q9BUP0 239 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 GLOD4Q9HC38 313 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 SPAG4Q9NPE6 437 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 THEGQ9P2T0 379 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 RAD54BQ9Y620 910 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 CEPT1Q9Y6K0 416 aa7.59□□□□□ -1.19
SMARCC1-202ENST00000425518 FAM149AA5PLN7 773 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 NPHS1O60500 1241 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SMIM10L2AP0DMW4 78 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SMIM10L2BP0DMW5 78 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CDH2P19022 906 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 LRPAP1P30533 357 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ETFBP38117 255 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ARCN1P48444 511 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 HCAR3P49019 387 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms