RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 BBS5Q8N3I7 341 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 ACRBPQ8NEB7 543 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 SKA1Q96BD8 255 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 PSKH2Q96QS6 385 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 TUBGCP5Q96RT8 1024 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 ATP13A3Q9H7F0 1226 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 FZD3Q9NPG1 666 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 CA5BQ9Y2D0 317 aa22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 FNDC3AQ9Y2H6 1198 aaKnown RBP22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 REXO2Q9Y3B8 237 aaKnown RBP22.58■■□□□ 1.21
PTCHD3P2-201ENST00000424937 A0A1W2PR77 199 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 RCCD1A6NED2 376 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PRAMEF26H0Y7S4 382 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SPINT1O43278 529 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 XPAP23025 273 aaPredicted RBP22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SERPINA4P29622 427 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 GARSP41250 739 aaKnown RBP22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SCNN1BP51168 640 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 RPS21P63220 83 aaKnown RBP22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TTC7BQ86TV6 843 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CAMK1DQ8IU85 385 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 LRRC49Q8IUZ0 686 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TMEM139Q8IV31 216 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PAF1Q8N7H5 531 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 FEM1CQ96JP0 617 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 RNF157Q96PX1 679 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SUV39H2Q9H5I1 410 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DDX56Q9NY93 547 aaKnown RBP22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ALG6Q9Y672 507 aa22.57■■□□□ 1.2
PTCHD3P2-201ENST00000424937 C3orf70A6NLC5 250 aaPredicted RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZNF487B1APH4 448 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PSTPIP1O43586 416 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TSPAN6O43657 245 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 HNRNPA2B1P22626 353 aaKnown RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 HSPA9P38646 679 aaKnown RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CTSKP43235 329 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MMP13P45452 471 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NOVA1P51513 510 aaKnown RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 AP1S1P61966 158 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 GBE1Q04446 702 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 STAT4Q14765 748 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PSAPL1Q6NUJ1 521 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 C11orf63Q6NUN7 778 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 RNF25Q96BH1 459 aaPredicted RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZNF641Q96N77 438 aaPredicted RBP22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SALL4Q9UJQ4 1053 aa22.56■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PCNX2A6NKB5 2137 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TDRD6O60522 2096 aaKnown RBP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TSPAN11A1L157 253 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 UPK3BL1B0FP48 263 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 UPK3BL2E5RIL1 263 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 KCNK3O14649 394 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 APOL1O14791 398 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 AREL1O15033 823 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TIMP2P16035 220 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 AKT2P31751 481 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 VAV2P52735 878 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 BCL2L1Q07817 233 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NSUN2Q08J23 767 aaKnown RBP eCLIP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 IFI16Q16666 785 aaKnown RBP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MARC1Q5VT66 337 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TIGD7Q6NT04 549 aaPredicted RBP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DAAM2Q86T65 1068 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 KIAA1328Q86T90 577 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 VSIG1Q86XK7 387 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 RFX6Q8HWS3 928 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PGBD5Q8N414 524 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MFSD2AQ8NA29 543 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DEFB124Q8NES8 71 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TPCN2Q8NHX9 752 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZNF830Q96NB3 372 aaPredicted RBP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MGME1Q9BQP7 344 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MAK16Q9BXY0 300 aaKnown RBP22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TM7SF3Q9NS93 570 aa22.55■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TTC24A2A3L6 582 aaPredicted RBP22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 H0Y8X5 98 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 KCNK5O95279 499 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CD59P13987 128 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ITIH2P19823 946 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MX2P20592 715 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MAXP61244 160 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SLC14A1Q13336 389 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 FGL2Q14314 439 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 BRAT1Q6PJG6 821 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 IQCHQ86VS3 1027 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZSCAN30Q86W11 494 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZSWIM9Q86XI8 627 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PLD5Q8N7P1 536 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TMEM145Q8NBT3 493 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 HCAR2Q8TDS4 363 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 LRRN4Q8WUT4 740 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SLC17A9Q9BYT1 436 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NT5MQ9NPB1 228 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SCUBE2Q9NQ36 999 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 GDF3Q9NR23 364 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DTLQ9NZJ0 730 aa22.54■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MED19A0JLT2 244 aaPredicted RBP22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 IGLON5A6NGN9 336 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TLR4O00206 839 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms