RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.06□□□□□ -0.64
TOP3B-203ENST00000424393 MAML1Q92585 1016 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 HDAC11Q96DB2 347 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 TSGA13Q96PP4 275 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 NUSAP1Q9BXS6 441 aaKnown RBP11.06□□□□□ -0.64
TOP3B-203ENST00000424393 PREBQ9HCU5 417 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 GGT7Q9UJ14 662 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 SLC6A14Q9UN76 642 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 ZFR2Q9UPR6 939 aaKnown RBP11.06□□□□□ -0.64
TOP3B-203ENST00000424393 FADS3Q9Y5Q0 445 aa11.06□□□□□ -0.64
TOP3B-203ENST00000424393 TP53BP1Q12888 1972 aaPredicted RBP11.06□□□□□ -0.64
TOP3B-203ENST00000424393 hCG_1818297A0A087WSY0 165 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 TSPAN11A1L157 253 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 WNT9AO14904 365 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MATN3O15232 486 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 BCAT2O15382 392 aaPredicted RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 ZRANB2O95218 330 aaKnown RBP eCLIP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 GNSP15586 552 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 ENGP17813 658 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MX2P20592 715 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 CCNCP24863 283 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MAT2AP31153 395 aaKnown RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 HSPA9P38646 679 aaKnown RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MMP13P45452 471 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 PEX5P50542 639 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 SCNN1BP51168 640 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MAXP61244 160 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 BNC1Q01954 994 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 HNRNPDQ14103 355 aaKnown RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 GRM3Q14832 879 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 LRRC73Q5JTD7 316 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MARC1Q5VT66 337 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 CAMK1DQ8IU85 385 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 RCOR2Q8IZ40 523 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 EXD1Q8NHP7 514 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 NSMCE1Q8WV22 266 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 FATE1Q969F0 183 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 SLC6A18Q96N87 628 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 OLFM3Q96PB7 478 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 TUBGCP5Q96RT8 1024 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 LGMNQ99538 433 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MGME1Q9BQP7 344 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 HERPUD2Q9BSE4 406 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 EDEM2Q9BV94 578 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 MAK16Q9BXY0 300 aaKnown RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 SUV39H2Q9H5I1 410 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 TM9SF3Q9HD45 589 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 DKK3Q9UBP4 350 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 ITM2BQ9Y287 266 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
TOP3B-203ENST00000424393 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 HEY1Q9Y5J3 304 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 CAPN6Q9Y6Q1 641 aa11.05□□□□□ -0.64
TOP3B-203ENST00000424393 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 A0A1W2PQU0 124 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CCDC66A2RUB6 948 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CDX4O14627 284 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 AREL1O15033 823 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 AP1G1O43747 822 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CST8O60676 142 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 FTCDO95954 541 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 WNT1P04628 370 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 TIMP2P16035 220 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 PECAM1P16284 738 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ITIH2P19823 946 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 AP1S1P61966 158 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 PPIDQ08752 370 aaKnown RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 TFDP2Q14188 446 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 PPP2R5EQ16537 467 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ZNF284Q2VY69 593 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 TMEM259Q4ZIN3 620 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 FAM182AQ5T1J6 154 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 KAZNQ674X7 775 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 SEL1L3Q68CR1 1132 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 TIGD7Q6NT04 549 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 NEK5Q6P3R8 708 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 PRPF39Q86UA1 669 aaKnown RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 HORMAD1Q86X24 394 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CCDC50Q8IVM0 306 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CCDC13Q8IYE1 715 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 BBS5Q8N3I7 341 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 CCNYQ8ND76 341 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 HCAR2Q8TDS4 363 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ALG3Q92685 438 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 KLK6Q92876 244 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 RAB7BQ96AH8 199 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ECHDC3Q96DC8 303 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ZNF641Q96N77 438 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-203ENST00000424393 NUDCD1Q96RS6 583 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 ATP13A3Q9H7F0 1226 aa11.04□□□□□ -0.64
TOP3B-203ENST00000424393 NT5MQ9NPB1 228 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms