RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	E2F7	Q96AV8	911 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	MYRFL	Q96LU7	910 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	LRRC37B	Q96QE4	947 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	RANBP9	Q96S59	729 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	RBBP8	Q99708	897 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	FAM96A	Q9H5X1	160 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	TBC1D17	Q9HA65	648 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	TXLNG	Q9NUQ3	528 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	MID2	Q9UJV3	735 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	CA14	Q9ULX7	337 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	SSX2IP	Q9Y2D8	614 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	SLC27A5	Q9Y2P5	690 aa		10.16	□□□□□ -0.78
POLR1A-204	ENST00000424089	MIA3	Q5JRA6	1907 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	NARS	O43776	548 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	TLR5	O60602	858 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	UGT1A9	O60656	530 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	RAMP2	O60895	175 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SIN3B	O75182	1162 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	ABLIM3	O94929	683 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	PAPSS2	O95340	614 aa	Predicted RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	VNN2	O95498	520 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	APOA4	P06727	396 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	BPGM	P07738	259 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	ERVK-10	P10266	1014 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SRF	P11831	508 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CES1	P23141	567 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	GRK2	P25098	689 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	TYK2	P29597	1187 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	HARS2	P49590	506 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	RASSF2	P50749	326 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CLCN4	P51793	760 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CRADD	P78560	199 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	BMPR2	Q13873	1038 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CERCAM	Q5T4B2	595 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	FBXL22	Q6P050	247 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	STRA8	Q7Z7C7	330 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	KCNMB4	Q86W47	210 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CNTN4	Q8IWV2	1026 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	LMNTD2	Q8IXW0	634 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	ZNF461	Q8TAF7	563 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	C10orf82	Q8WW14	230 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SREK1	Q8WXA9	508 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SPOCK2	Q92563	424 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	PLD4	Q96BZ4	506 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	IMP4	Q96G21	291 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	TRMT2B	Q96GJ1	504 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	FCRL3	Q96P31	734 aa	Predicted RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	DDX50	Q9BQ39	737 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	FSD1L	Q9BXM9	530 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SLC13A1	Q9BZW2	595 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	MAGEH1	Q9H213	219 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	NOL6	Q9H6R4	1146 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	UGT1A7	Q9HAW7	530 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	UGT1A10	Q9HAW8	530 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	UGT1A8	Q9HAW9	530 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SLCO1B3	Q9NPD5	702 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SAR1A	Q9NR31	198 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	MRPL17	Q9NRX2	175 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	PCMTD2	Q9NV79	361 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	MPP6	Q9NZW5	540 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	NUDT5	Q9UKK9	219 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	RALY	Q9UKM9	306 aa	Known RBP	10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	ANKRD6	Q9Y2G4	727 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	SIT1	Q9Y3P8	196 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	CDY1	Q9Y6F8	540 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	ACACB	O00763	2458 aa		10.15	□□□□□ -0.78
POLR1A-204	ENST00000424089	PTPRD	P23468	1912 aa		10.15	□□□□□ -0.79
POLR1A-204	ENST00000424089	BAHCC1	Q9P281	2608 aa		10.15	□□□□□ -0.79
POLR1A-204	ENST00000424089	HEATR9	A2RTY3	570 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	WDR91	A4D1P6	747 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	KRBA1	A5PL33	1030 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089		F5H423	210 aa	Predicted RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089		F5H5T6	163 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	ATP9B	O43861	1147 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	ACSL4	O60488	711 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	DNAJC6	O75061	913 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	USP12	O75317	370 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	H2AFY	O75367	372 aa	Known RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	UBOX5	O94941	541 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	PEX11B	O96011	259 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	EPO	P01588	193 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	ALDOA	P04075	364 aa	Known RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	SOD2	P04179	222 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	HLA-DQB2	P05538	268 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	ADH1A	P07327	375 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	SP9	P0CG40	484 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	COL6A2	P12110	1019 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	TACR2	P21452	398 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	BGN	P21810	368 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	PRKAA2	P54646	552 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	TMPRSS15	P98073	1019 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	DSG1	Q02413	1049 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	CREM	Q03060	361 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	SERINC3	Q13530	473 aa		10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	PDE1C	Q14123	709 aa	Predicted RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	POLD3	Q15054	466 aa	Predicted RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	TTC31	Q49AM3	519 aa	Predicted RBP	10.14	□□□□□ -0.79
POLR1A-204	ENST00000424089	RABGAP1L	Q5R372	815 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms