RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 LRRD1A4D1F6 860 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 UPK3BL1B0FP48 263 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 C10orf142B7Z368 130 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 UPK3BL2E5RIL1 263 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 RNF103O00237 685 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 SLC31A1O15431 190 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 NEBLO76041 1014 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CD48P09326 243 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CEACAM1P13688 526 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 TNNT1P13805 278 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 PRLRP16471 622 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 MX2P20592 715 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 KDELR1P24390 212 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 IL4RP24394 825 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 SERPINA4P29622 427 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CDC25BP30305 580 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CTSKP43235 329 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CCT8P50990 548 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 ARSEP51690 589 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 AP1S1P61966 158 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 BCL2L1Q07817 233 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 NSUN2Q08J23 767 aaKnown RBP eCLIP11.07□□□□□ -0.64
USP49-204ENST00000423567 HNRNPDQ14103 355 aaKnown RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 LRRC38Q5VT99 294 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 TIGD7Q6NT04 549 aaPredicted RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 ERAP2Q6P179 960 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 BRAT1Q6PJG6 821 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 LAYNQ6UX15 382 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 IQCHQ86VS3 1027 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CPNE8Q86YQ8 564 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 RHOT1Q8IXI2 618 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 TXLNBQ8N3L3 684 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 MFSD2AQ8NA29 543 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 TSEN2Q8NCE0 465 aaKnown RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 CXorf40AQ8TE69 158 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 ZNF641Q96N77 438 aaPredicted RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 PSKH2Q96QS6 385 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 SUV39H2Q9H5I1 410 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 GDF3Q9NR23 364 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 TM7SF3Q9NS93 570 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 PCDHB9Q9Y5E1 797 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 EPN1Q9Y6I3 576 aaPredicted RBP11.07□□□□□ -0.64
USP49-204ENST00000423567 CEP192Q8TEP8 1941 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
USP49-204ENST00000423567 NUMA1Q14980 2115 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 BHMG1C9JSJ3 638 aaPredicted RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 TLR4O00206 839 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 YKT6O15498 198 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 INSIG1O15503 277 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 MFSD11O43934 449 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 GJB3O75712 270 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 NDUFA10O95299 355 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 PIGNO95427 931 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 KRT1P04264 644 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 COMTP21964 271 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 HNRNPA2B1P22626 353 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 NFKBIAP25963 317 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 MMP13P45452 471 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 ARRB1P49407 418 aaPredicted RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 SCNN1BP51168 640 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 NAP1L1P55209 391 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 BNC1Q01954 994 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 SLC10A7Q0GE19 358 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 ELP6Q0PNE2 266 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 PAFAH1B3Q15102 231 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 IFI16Q16666 785 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 ZNF284Q2VY69 593 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 INAVAQ3KP66 663 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 TMEM259Q4ZIN3 620 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 MARC1Q5VT66 337 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 SEL1L3Q68CR1 1132 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 NCBP2-AS2Q69YL0 99 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 PSAPL1Q6NUJ1 521 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 TP53INP2Q8IXH6 220 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 OXR1Q8N573 874 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 SPC24Q8NBT2 197 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 DEFB124Q8NES8 71 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 PCDH19Q8TAB3 1148 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 SETD7Q8WTS6 366 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 KLK6Q92876 244 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 FAF2Q96CS3 445 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 BAG1Q99933 345 aaPredicted RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 MYOCQ99972 504 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 SLC17A9Q9BYT1 436 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 PCDHGB2Q9Y5G2 931 aa11.06□□□□□ -0.64
USP49-204ENST00000423567 NYNRINQ9P2P1 1898 aaKnown RBP11.06□□□□□ -0.64
USP49-204ENST00000423567 A0A0A6YYK5 440 aaPredicted RBP11.05□□□□□ -0.64
USP49-204ENST00000423567 A0A1W2PQ67 120 aa11.05□□□□□ -0.64
USP49-204ENST00000423567 A0A1W2PR77 199 aa11.05□□□□□ -0.64
USP49-204ENST00000423567 ZNF487B1APH4 448 aa11.05□□□□□ -0.64
USP49-204ENST00000423567 H0Y8X5 98 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms