RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 LRRC10BA6NIK2 292 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 MMP20O60882 483 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 CCDC172P0C7W6 258 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 FERP16591 822 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 DESP17661 470 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 ACTN2P35609 894 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 THOP1P52888 689 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 EIF2B5Q13144 721 aaKnown RBP18.71■□□□□ 0.59
SREBF1-206ENST00000423161 NCAPHQ15003 741 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 PARP15Q460N3 678 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 PPP1R15BQ5SWA1 713 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
SREBF1-206ENST00000423161 MCOLN2Q8IZK6 566 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 IFI44Q8TCB0 444 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 LMX1AQ8TE12 382 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 CXorf40AQ8TE69 158 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 FGF11Q92914 225 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 CENPTQ96BT3 561 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 BBC3Q96PG8 261 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-206ENST00000423161 NCAPGQ9BPX3 1015 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 C1QTNF7Q9BXJ2 289 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 DKK3Q9UBP4 350 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 LHX3Q9UBR4 397 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 MFHAS1Q9Y4C4 1052 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 BPTFQ12830 3046 aa18.71■□□□□ 0.59
SREBF1-206ENST00000423161 KIF26BQ2KJY2 2108 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 FGF10O15520 208 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-206ENST00000423161 TM7SF2O76062 418 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 ITIH2P19823 946 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 XPAP23025 273 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-206ENST00000423161 TPI1P60174 286 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 PTK2BQ14289 1009 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 DEFB133Q30KQ1 61 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 TBC1D25Q3MII6 688 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 ACAD10Q6JQN1 1059 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 RBFAQ8N0V3 343 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 UMODL1-AS1Q8N2C9 162 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 AOPEPQ8N6M6 819 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 BTN2A2Q8WVV5 523 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 EXOC2Q96KP1 924 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 IL12RB2Q99665 862 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 WRAP53Q9BUR4 548 aaKnown RBP18.7■□□□□ 0.58
SREBF1-206ENST00000423161 ABCG4Q9H172 646 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 HSD3B7Q9H2F3 369 aa18.7■□□□□ 0.58
SREBF1-206ENST00000423161 APOBEC3BQ9UH17 382 aaKnown RBP18.7■□□□□ 0.58
SREBF1-206ENST00000423161 GOLGA6L22H0YM25 854 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 INSIG1O15503 277 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 PIGNO95427 931 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 ATP1A3P13637 1013 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 TIMP2P16035 220 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 OGDHQ02218 1023 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 CDKN3Q16667 212 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 KLHL40Q2TBA0 621 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 GUSBP11Q6P575 273 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 PHACTR4Q8IZ21 702 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 MAPK15Q8TD08 544 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 CPEB1Q9BZB8 566 aaKnown RBP18.69■□□□□ 0.58
SREBF1-206ENST00000423161 TCEAL2Q9H3H9 227 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-206ENST00000423161 GPATCH2LQ9NWQ4 482 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 TAS2R14Q9NYV8 317 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 NCKIPSDQ9NZQ3 722 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 SPASTQ9UBP0 616 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 UBA2Q9UBT2 640 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-206ENST00000423161 SALL4Q9UJQ4 1053 aa18.69■□□□□ 0.58
SREBF1-206ENST00000423161 CPED1A4D0V7 1026 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 TPP1O14773 563 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 CSO75390 466 aaKnown RBP18.68■□□□□ 0.58
SREBF1-206ENST00000423161 MPOP05164 745 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 TNFAIP3P21580 790 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 HTR7P34969 479 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 YPEL5P62699 121 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 ELP6Q0PNE2 266 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 CYTH1Q15438 398 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 PRRT3Q5FWE3 981 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 CCDC183Q5T5S1 534 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 MACC1Q6ZN28 852 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 EFL1Q7Z2Z2 1120 aaKnown RBP18.68■□□□□ 0.58
SREBF1-206ENST00000423161 DNAAF5Q86Y56 855 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 TP53I13Q8NBR0 393 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-206ENST00000423161 MBNL1Q9NR56 388 aaKnown RBP18.68■□□□□ 0.58
SREBF1-206ENST00000423161 PNMA8BQ9ULN7 279 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-206ENST00000423161 AP4E1Q9UPM8 1137 aa18.68■□□□□ 0.58
SREBF1-206ENST00000423161 EIF4E1BA6NMX2 242 aaKnown RBP18.67■□□□□ 0.58
SREBF1-206ENST00000423161 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 TOR1BO14657 336 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 RIOK3O14730 519 aaKnown RBP18.67■□□□□ 0.58
SREBF1-206ENST00000423161 ATMINO43313 823 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-206ENST00000423161 USP12O75317 370 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 GCATO75600 419 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 PSMA2P25787 234 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 EIF4A3P38919 411 aaKnown RBP18.67■□□□□ 0.58
SREBF1-206ENST00000423161 SUOXP51687 545 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 GABREP78334 506 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 C1orf61Q13536 156 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 GRM3Q14832 879 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 IRF4Q15306 451 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 NR0B2Q15466 257 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 TMEM52BQ4KMG9 183 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms