RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 SNX29P2Q8IUI4 249 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CPNE9Q8IYJ1 553 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 RASGEF1CQ8N431 466 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CCDC33Q8N5R6 958 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 AGR3Q8TD06 166 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SNX19Q92543 992 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TMA16Q96EY4 203 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 HES6Q96HZ4 224 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CEP170P1Q96L14 293 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 B3GALT6Q96L58 329 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ACCSQ96QU6 501 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 MRPL4Q9BYD3 311 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 REXO4Q9GZR2 422 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 LMAN2LQ9H0V9 348 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TRIT1Q9H3H1 467 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZNF696Q9H7X3 374 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CDHR5Q9HBB8 845 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 BRD7Q9NPI1 651 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 AGPAT3Q9NRZ7 376 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TRMT13Q9NUP7 481 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ADPRHL2Q9NX46 363 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GCNT4Q9P109 453 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 WHRNQ9P202 907 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SLC17A7Q9P2U7 560 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZNHIT2Q9UHR6 403 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 VANGL2Q9ULK5 521 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 POMPQ9Y244 141 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SNX5Q9Y5X3 404 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PLXNA2O75051 1894 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CHD7Q9P2D1 2997 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TRIM64A6NGJ6 449 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TRIM64BA6NI03 449 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 C16orf96A6NNT2 1141 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ATP6V1G2-DDX39BF2Z307 99 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZW10O43264 779 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 MYL3P08590 195 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 LSM3P62310 102 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 INCA1Q0VD86 236 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PEX6Q13608 980 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SURF1Q15526 300 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TBCCQ15814 346 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 NFE2Q16621 373 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 EPC2Q52LR7 807 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GJB7Q6PEY0 223 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 C7orf61Q8IZ16 206 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SAMD14Q8IZD0 417 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TMEM199Q8N511 208 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PSD4Q8NDX1 1056 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ADCY4Q8NFM4 1077 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SLC22A8Q8TCC7 542 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ALG3Q92685 438 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 VPS33AQ96AX1 596 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PPP1R36Q96LQ0 422 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZNF560Q96MR9 790 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 RSPH9Q9H1X1 276 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SETD4Q9NVD3 440 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZDHHC7Q9NXF8 308 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 EMC3Q9P0I2 261 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 KCNN3Q9UGI6 736 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TMCC3Q9ULS5 477 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PCDHA11Q9Y5I1 949 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 FAM172BPA6NC97 362 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 A8MV72 311 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 H0YC42 278 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TK2O00142 265 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 AGRPO00253 132 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 RGS5O15539 181 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 BUD23O43709 281 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CCNT2O60583 730 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 NOS1APO75052 506 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 FTLP02792 175 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GLULP15104 373 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ARF4P18085 180 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ITGALP20701 1170 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ENPP1P22413 925 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 IL12RB1P42701 662 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 MARCKSL1P49006 195 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PRKAA2P54646 552 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 NPEPPSP55786 919 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 WDR5P61964 334 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GPS1Q13098 491 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 PPP1R3AQ16821 1122 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 FAM182AQ5T1J6 154 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 NOTUMQ6P988 496 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 DCUN1D2Q6PH85 259 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 STXBP4Q6ZWJ1 553 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 HAUS6Q7Z4H7 955 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 WDR49Q8IV35 697 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ZC3H7AQ8IWR0 971 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GALNT12Q8IXK2 581 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 CADM2Q8N3J6 435 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 LRRC52Q8N7C0 313 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 LILRB1Q8NHL6 650 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 GRPEL2Q8TAA5 225 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 TRUB1Q8WWH5 349 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ASB12Q8WXK4 309 aa4.93□□□□□ -1.62
ITGB1-205ENST00000423113 ALKBH8Q96BT7 664 aaKnown RBP4.93□□□□□ -1.62
ITGB1-205ENST00000423113 SIPA1Q96FS4 1042 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms