RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 TBL3Q12788 808 aaKnown RBP4.15□□□□□ -1.75
LINC00397-201ENST00000422074 GAGE1Q13065 139 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 GAGE4Q13068 117 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 CAPSQ13938 189 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 ANKRD1Q15327 319 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 ZRSR1Q15695 479 aaKnown RBP4.15□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF672Q499Z4 452 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF628Q5EBL2 1059 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 IL20RBQ6UXL0 311 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 MB21D2Q8IYB1 491 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-201ENST00000422074 CEP70Q8NHQ1 597 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 SNAPC3Q92966 411 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 TXNDC15Q96J42 360 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 LRFN5Q96NI6 719 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 TWNKQ96RR1 684 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 RPS6KC1Q96S38 1066 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 PKP4Q99569 1192 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 STN1Q9H668 368 aaKnown RBP4.15□□□□□ -1.75
LINC00397-201ENST00000422074 NDRG3Q9UGV2 375 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 ICAM5Q9UMF0 924 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 COMMD10Q9Y6G5 202 aa4.15□□□□□ -1.75
LINC00397-201ENST00000422074 A0A087WYN8 130 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 MAGEA13PA6NCF6 341 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 ANP32CO43423 234 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 TSPAN3O60637 253 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 DDNO94850 711 aaPredicted RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 CH25HO95992 272 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 LDHAP00338 332 aaKnown RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 IGHV4-30-4P0DP06 118 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 SRD5A1P18405 259 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 CD72P21854 359 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 RPL3P39023 403 aaKnown RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 PAPOLAP51003 745 aaKnown RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 DLX5P56178 289 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 DLG1Q12959 904 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 SLC39A14Q15043 492 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 TAF5Q15542 800 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 SETMARQ53H47 684 aaPredicted RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 TYW3Q6IPR3 259 aaKnown RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 NR2C2APQ86WQ0 139 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 CPXM2Q8N436 756 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 SPATA5Q8NB90 893 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 DNAAF1Q8NEP3 725 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 RFWD2Q8NHY2 731 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 IGSF21Q96ID5 467 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 MMTAG2Q9BU76 263 aaKnown RBP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 ISCA1Q9BUE6 129 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC00397-201ENST00000422074 TAOK3Q9H2K8 898 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 ITM2CQ9NQX7 267 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 TXLNGQ9NUQ3 528 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 OR6C3Q9NZP0 311 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 NFS1Q9Y697 457 aa4.14□□□□□ -1.75
LINC00397-201ENST00000422074 NPIPB11E5RHQ5 1161 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 SLC25A17O43808 307 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 TCEA3O75764 348 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF432O94892 652 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 IGKV3-20P01619 116 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 PTPN2P17706 415 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 PEX5P50542 639 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 MYBPHQ13203 477 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 SNTA1Q13424 505 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 BIRC2Q13490 618 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 SF3B4Q15427 424 aaKnown RBP eCLIP4.13□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF718Q3SXZ3 478 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 FAM76BQ5HYJ3 339 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 BBS12Q6ZW61 710 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 C2CD5Q86YS7 1000 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 CCDC105Q8IYK2 499 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 PGBD5Q8N414 524 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 LSM14AQ8ND56 463 aaKnown RBP4.13□□□□□ -1.75
LINC00397-201ENST00000422074 GDPD5Q8WTR4 605 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 CCT6BQ92526 530 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 NR4A3Q92570 626 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 CNOT9Q92600 299 aaKnown RBP4.13□□□□□ -1.75
LINC00397-201ENST00000422074 BICD1Q96G01 975 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 SCMH1Q96GD3 660 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 ADGRG7Q96K78 797 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 COG8Q96MW5 612 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 CD180Q99467 661 aa4.13□□□□□ -1.75
LINC00397-201ENST00000422074 A0A0U1RQF3 1178 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ARHGAP10A1A4S6 786 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 KLK10O43240 276 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 F7P08709 466 aaPredicted RBP4.12□□□□□ -1.75
LINC00397-201ENST00000422074 WEE2P0C1S8 567 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF8P17098 575 aaPredicted RBP4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ITGAXP20702 1163 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 XKR9Q5GH70 373 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 WDR45BQ5MNZ6 344 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ANKRD45Q5TZF3 282 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 OTULINQ96BN8 352 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
LINC00397-201ENST00000422074 ARPC5LQ9BPX5 153 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 REEP2Q9BRK0 252 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 EPHX3Q9H6B9 360 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 PTPRHQ9HD43 1115 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 PCDHGB5Q9Y5G0 923 aa4.12□□□□□ -1.75
LINC00397-201ENST00000422074 GOLGA6L10A0A0M3HER8 536 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms