RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SUV39H2Q9H5I1 410 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PCDH9Q9HC56 1237 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 DYRK4Q9NR20 520 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PAK5Q9P286 719 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 EBF1Q9UH73 591 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PCDHGC4Q9Y5F7 938 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 CACNA1IQ9P0X4 2223 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 DLL1O00548 723 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 TRAFD1O14545 582 aaPredicted RBP17.71■□□□□ 0.43
LINC00271-201ENST00000421378 ZSCAN5DPP0CG00 497 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 CA4P22748 312 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 ITGB7P26010 798 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 HOXA6P31267 233 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 SKOR1P84550 965 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 PRPSAP1Q14558 356 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 SLC14A2Q15849 920 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 MAML2Q8IZL2 1156 aaPredicted RBP17.71■□□□□ 0.43
LINC00271-201ENST00000421378 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 PDCD6IPQ8WUM4 868 aaKnown RBP17.71■□□□□ 0.43
LINC00271-201ENST00000421378 SLCO2A1Q92959 643 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 KRT12Q99456 494 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 TDRD1Q9BXT4 1180 aaKnown RBP17.71■□□□□ 0.43
LINC00271-201ENST00000421378 TPSD1Q9BZJ3 242 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 PABPC3Q9H361 631 aaKnown RBP17.71■□□□□ 0.43
LINC00271-201ENST00000421378 VPS45Q9NRW7 570 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 FAM153AQ9UHL3 310 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 RAI2Q9Y5P3 530 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 WDFY4Q6ZS81 3184 aa17.71■□□□□ 0.43
LINC00271-201ENST00000421378 ANXA9O76027 345 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 DR1Q01658 176 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 CSTF1Q05048 431 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TRAF2Q12933 501 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 IHHQ14623 411 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PARP6Q2NL67 630 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 AADATQ8N5Z0 425 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 MNS1Q8NEH6 495 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TADA1Q96BN2 335 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 ECHDC3Q96DC8 303 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 OXNAD1Q96HP4 312 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 OMDQ99983 421 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 FBXL12Q9NXK8 326 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 FBXO4Q9UKT5 387 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 AAR2Q9Y312 384 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 A0A1W2PP55 124 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 HTRA2O43464 458 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 ZNF217O75362 1048 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PMPCBO75439 489 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 RNASEH2AO75792 299 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 METTL18O95568 372 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 KRT14P02533 472 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TDGF1P13385 188 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 RPL22P35268 128 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 DRD3P35462 400 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TPMTP51580 245 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 SFSWAPQ12872 951 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 MPP3Q13368 585 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PPP1R7Q15435 360 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PCSK7Q16549 785 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 KCTD19Q17RG1 926 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 BRAT1Q6PJG6 821 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 C4orf22Q6V702 233 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 USP30Q70CQ3 517 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PARS2Q7L3T8 475 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 HDDC3Q8N4P3 179 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 TAB3Q8N5C8 712 aaPredicted RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 GANCQ8TET4 914 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 ARRDC3Q96B67 414 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 GORASP1Q9BQQ3 440 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 USP36Q9P275 1121 aaKnown RBP17.7■□□□□ 0.42
LINC00271-201ENST00000421378 DKK3Q9UBP4 350 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 PCDHB9Q9Y5E1 797 aa17.7■□□□□ 0.42
LINC00271-201ENST00000421378 CCDC163A0A0D9SF12 145 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 A0A1W2PQ67 120 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 GOLGA6CA6NDK9 693 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 GOLGA6BA6NDN3 693 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 C16orf96A6NNT2 1141 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 AXIN1O15169 862 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 PGLSO95336 258 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 GOLGA6DP0CG33 693 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 FDFT1P37268 417 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 VPS41P49754 854 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 NEK3P51956 506 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 NUBP1P53384 320 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 GEMP55040 296 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 CCDC15Q0P6D6 951 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 CNTN1Q12860 1018 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 DHX34Q14147 1143 aaKnown RBP17.69■□□□□ 0.42
LINC00271-201ENST00000421378 ARMC12Q5T9G4 340 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 FAXCQ5TGI0 409 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 FBXL19Q6PCT2 694 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 ERN2Q76MJ5 926 aaKnown RBP17.69■□□□□ 0.42
LINC00271-201ENST00000421378 KBTBD6Q86V97 674 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 HCAR2Q8TDS4 363 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 SPOCK2Q92563 424 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 LRFN3Q9BTN0 628 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 FSD1LQ9BXM9 530 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 HDAC8Q9BY41 377 aa17.69■□□□□ 0.42
LINC00271-201ENST00000421378 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms