RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HCAR2Q8TDS4 363 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 VOPP1Q96AW1 172 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SRPK1Q96SB4 655 aaKnown RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 KIFC1Q9BW19 673 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 FSD1LQ9BXM9 530 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 TDRD1Q9BXT4 1180 aaKnown RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ROPN1BQ9BZX4 212 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 C8orf33Q9H7E9 229 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ROPN1Q9HAT0 212 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 KCNK12Q9HB15 430 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 MUTYHQ9UIF7 546 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC8A2Q9UPR5 921 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 FAM237BA0A1B0GVD1 139 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 TRAFD1O14545 582 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SMAD6O43541 496 aaKnown RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ALDH1A2O94788 518 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 PAPSS2O95340 614 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 NDST3O95803 873 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 IGSF6O95976 241 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ATXN1LP0C7T5 689 aaKnown RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 HNRNPLP14866 589 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ELK3P41970 407 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 TNFRSF4P43489 277 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SCNN1BP51168 640 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ITKQ08881 620 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GRM2Q14416 872 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 C22orf39Q6P5X5 142 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC44A3Q8N4M1 653 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 NAT16Q8N8M0 369 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GDAP1L1Q96MZ0 367 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ZNF641Q96N77 438 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ADGRE3Q9BY15 652 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC2A4RGQ9NR83 387 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GTSE1Q9NYZ3 720 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 PPIL1Q9Y3C6 166 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 HCN4Q9Y3Q4 1203 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ACTL7AQ9Y615 435 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 COL4A3Q01955 1670 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 FAM86C2PA6NEL3 165 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 K7ERQ8 282 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 AVILO75366 819 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 SASH3O75995 380 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 USP1O94782 785 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 POP4O95707 220 aaKnown RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 AGTP01019 485 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PRLP01236 227 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PGAM1P18669 254 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PRKCHP24723 683 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PHBP35232 272 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 CTSOP43234 321 aaPredicted RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC6A11P48066 632 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 GPX6P59796 221 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PFKPQ01813 784 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC29A2Q14542 456 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 STAT4Q14765 748 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 DLG2Q15700 870 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 KYNUQ16719 465 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 MYLK3Q32MK0 819 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 BBS9Q3SYG4 887 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 CARD16Q5EG05 197 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PCID2Q5JVF3 399 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 DENND2CQ68D51 928 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 LEKR1Q6ZMV7 388 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 NLRP9Q7RTR0 991 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 MTERF4Q7Z6M4 381 aaKnown RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 CCDC25Q86WR0 208 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 RALGPS2Q86X27 583 aaPredicted RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 TAB3Q8N5C8 712 aaPredicted RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 DNAAF3Q8N9W5 541 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 FBXO36Q8NEA4 188 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 OR52K1Q8NGK4 314 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 UCMAQ8WVF2 138 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 ECHDC3Q96DC8 303 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 STAMBPL1Q96FJ0 436 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 NSMCE3Q96MG7 304 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 SH3GL2Q99962 352 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 TMEM245Q9H330 911 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 MOCS1Q9NZB8 636 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 SOX13Q9UN79 622 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 PLA2G4CQ9UP65 541 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 FCF1Q9Y324 198 aaKnown RBP14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 TTLL3Q9Y4R7 772 aa14.4□□□□□ -0.1
SHMT1P1-201ENST00000419974 A0A087WUV0 522 aaPredicted RBP14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 PRRT4C9JH25 899 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 TRIM24O15164 1050 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 PMPCBO75439 489 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 KAT7O95251 611 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 ADRA1DP25100 572 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZXDAP98168 799 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 RAD51Q06609 339 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 SIRPB2Q5JXA9 342 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms