RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SH2D7A6NKC9 451 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 SMTNL1A8MU46 457 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 C17orf100A8MU93 164 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ZNF814B7Z6K7 855 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 KIF2AO00139 706 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 SOCS2O14508 198 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PPEF2O14830 753 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 HTATSF1O43719 755 aaKnown RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 NEMFO60524 1076 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ZC3H11AO75152 810 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS41-206ENST00000418457 MOSPD3O75425 235 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 CBX6O95503 412 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ADCY5O95622 1261 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 DDAH2O95865 285 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PYGLP06737 847 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 IFIT1P09914 478 aaKnown RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 CCDC192P0DO97 292 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 XBP1P17861 261 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PRKCHP24723 683 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PRKAR2BP31323 418 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 HNF1BP35680 557 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PSMC2P35998 433 aaKnown RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 SLC16A2P36021 539 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PGM1P36871 562 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 MTNR1AP48039 350 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ME1P48163 572 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ZNF81P51508 661 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 CCR5P51681 352 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 HSPA2P54652 639 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 VAMP2P63027 116 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS41-206ENST00000418457 SRSF1Q07955 248 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS41-206ENST00000418457 INPP5JQ15735 1006 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 ALFQ53S48 1182 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TTLL5Q6EMB2 1281 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 HMBOX1Q6NT76 420 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 C11orf87Q6NUJ2 197 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 GJB7Q6PEY0 223 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 LRRC8DQ7L1W4 858 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 KDELC2Q7Z4H8 507 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PIP4P1Q86T03 277 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 WDR5BQ86VZ2 330 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 SLC25A41Q8N5S1 370 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 KIAA1524Q8TCG1 905 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 FAR1Q8WVX9 515 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ANKRD7Q92527 254 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TBATAQ96M53 351 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ZNF778Q96MU6 729 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TEFMQ96QE5 360 aaKnown RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 CD180Q99467 661 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 NPLQ9BXD5 320 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 C1QTNF7Q9BXJ2 289 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 GPR63Q9BZJ6 419 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TSPYL1Q9H0U9 437 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TAOK3Q9H2K8 898 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 MROH8Q9H579 483 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 TTC12Q9H892 705 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 RNF146Q9NTX7 359 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 DECR2Q9NUI1 292 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ELOVL5Q9NYP7 299 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 C9orf78Q9NZ63 289 aaPredicted RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 BCCIPQ9P287 314 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS41-206ENST00000418457 PDP2Q9P2J9 529 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 RNF7Q9UBF6 113 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 SLC13A4Q9UKG4 626 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 GJD2Q9UKL4 321 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 PCDHA12Q9UN75 941 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 AFG3L2Q9Y4W6 797 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 C3P01024 1663 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 FAM208AQ9UK61 1670 aaKnown RBP2.84□□□□□ -1.95
VPS41-206ENST00000418457 RGPD1P0DJD0 1748 aa2.84□□□□□ -1.96
VPS41-206ENST00000418457 CRYBG1Q9Y4K1 1723 aa2.84□□□□□ -1.96
VPS41-206ENST00000418457 RPAP1Q9BWH6 1393 aaPredicted RBP2.84□□□□□ -1.96
VPS41-206ENST00000418457 MYO5BQ9ULV0 1848 aa2.84□□□□□ -1.96
VPS41-206ENST00000418457 ADGRL3Q9HAR2 1447 aa2.84□□□□□ -1.96
VPS41-206ENST00000418457 TCHHQ07283 1943 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 CFAP65Q6ZU64 1925 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 LRRC37A3O60309 1634 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 SETD1AO15047 1707 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 NALCNQ8IZF0 1738 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 XRN1Q8IZH2 1706 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 FMN2Q9NZ56 1722 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 TRBV5-7A0A0A0MS05 114 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 CCDC196A0A1B0GTZ2 297 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 FAM90A7PA6NKC0 464 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 A6NNC1 897 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 FAM90A22PA8MWA6 464 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 FAM90A12PA8MX19 464 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 FAM90A23PA8MXZ1 464 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 HOXC11O43248 304 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 KIF1CO43896 1103 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 GUCY1B2O75343 617 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 TMCC1O94876 653 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 NDUFB8O95169 186 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 CHRNB1P11230 501 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 PTGER1P34995 402 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 GPD2P43304 727 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 ALDH7A1P49419 539 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 CLCNKBP51801 687 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms