RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TRMT5Q32P41 509 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 EML3Q32P44 896 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF276Q8N554 614 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 KIAA1522Q9P206 1035 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF214Q9UL59 606 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 A0A087X0B3 334 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 LTA4HP09960 611 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TFPIP10646 304 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ELNP15502 786 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TAS2R41P59536 307 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FIGNQ5HY92 759 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 GCNT7Q6ZNI0 430 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ACO2Q99798 780 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ARHGAP20Q9P2F6 1191 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MYH2Q9UKX2 1941 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ZSCAN5CA6NGD5 496 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ERAL1O75616 437 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 CCNDBP1O95273 360 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MED26O95402 600 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ATP4AP20648 1035 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 A0A0A0MRY4 1105 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 KELP23276 732 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 TBC1D25Q3MII6 688 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 LPCAT2Q7L5N7 544 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 C12orf29Q8N999 325 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 NARS2Q96I59 477 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 SPATA13Q96N96 652 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 POLE3Q9NRF9 147 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF37AP17032 561 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ABCG1P45844 678 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ERVK-21P61565 698 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RAPSNQ13702 412 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MAP4K3Q8IVH8 894 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 C7orf61Q8IZ16 206 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 PDLIM2Q96JY6 352 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ANGPT4Q9Y264 503 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 KIDINS220Q9ULH0 1771 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 LOC100506127A0A0U1RQW1 187 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 SAMD4BQ5PRF9 694 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 CYB5D1Q6P9G0 228 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 IDI2Q9BXS1 227 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RHBDL2Q9NX52 303 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RPS6KA6Q9UK32 745 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 H7C0S8 307 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RECQL5O94762 991 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 SEC13P55735 322 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MSLNQ13421 630 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 NELL1Q92832 810 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 NMD3Q96D46 503 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MTMR9Q96QG7 549 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 MRTO4Q9UKD2 239 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 NDRG2Q9UN36 371 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 SLC28A2O43868 658 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ALOX12P18054 663 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
PTCH1-205ENST00000418258 DLG4P78352 724 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 RAD51AP1Q96B01 352 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 ACAT2Q9BWD1 397 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 FAM105AQ9NUU6 356 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 CLN6Q9NWW5 311 aa11.29□□□□□ -0.6
PTCH1-205ENST00000418258 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 SLIT1O75093 1534 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PTPN4P29074 926 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 HOXC12P31275 282 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms