RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PTAR1Q7Z6K3 402 aaPredicted RBP15.5■□□□□ 0.07
NUP50-204ENST00000417702 RAB44Q7Z6P3 723 aaPredicted RBP15.5■□□□□ 0.07
NUP50-204ENST00000417702 ABI3BPQ7Z7G0 1075 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 SLCO6A1Q86UG4 719 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 DCP2Q8IU60 420 aaKnown RBP15.5■□□□□ 0.07
NUP50-204ENST00000417702 PNPLA1Q8N8W4 532 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 HCAR2Q8TDS4 363 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 CXorf40AQ8TE69 158 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 ASB12Q8WXK4 309 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 VOPP1Q96AW1 172 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 ZNF641Q96N77 438 aaPredicted RBP15.5■□□□□ 0.07
NUP50-204ENST00000417702 CSPG4P5Q96PW8 444 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 TUBGCP5Q96RT8 1024 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 C1QTNF2Q9BXJ5 285 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 CALN1Q9BXU9 219 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 SUV39H2Q9H5I1 410 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 PCDH18Q9HCL0 1135 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 KLHL11Q9NVR0 708 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 LCMT1Q9UIC8 334 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 ITM2BQ9Y287 266 aa15.5■□□□□ 0.07
NUP50-204ENST00000417702 FPGTO14772 594 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 PIGNO95427 931 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 TIMP2P16035 220 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 SERPINB6P35237 376 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 CSNK1DP48730 415 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 RENBPP51606 427 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 CDH6P55285 790 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 SLC25A11Q02978 314 aaKnown RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 BNIP3Q12983 259 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 LRRC73Q5JTD7 316 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 TXNRD3NBQ6F5E7 133 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 KYAT3Q6YP21 454 aaKnown RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 ARHGAP36Q6ZRI8 547 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 Q6ZSR6 202 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 SRLQ86TD4 932 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 PAF1Q8N7H5 531 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 OR13H1Q8NG92 308 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 LENG8Q96PV6 779 aaPredicted RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 C1QTNF7Q9BXJ2 289 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 ATP13A3Q9H7F0 1226 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 ABHD10Q9NUJ1 306 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 SEPT3Q9UH03 358 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 GGT7Q9UJ14 662 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 KLK13Q9UKR3 277 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 MSRB2Q9Y3D2 182 aa15.49■□□□□ 0.07
NUP50-204ENST00000417702 GOLGA4Q13439 2230 aaKnown RBP15.49■□□□□ 0.07
NUP50-204ENST00000417702 TP53BP1Q12888 1972 aaPredicted RBP15.48■□□□□ 0.07
NUP50-204ENST00000417702 RAD51BO15315 384 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 MFAP3LO75121 409 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 TM7SF2O76062 418 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 PROSCO94903 275 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 LDOC1O95751 146 aaPredicted RBP15.48■□□□□ 0.07
NUP50-204ENST00000417702 SERPINA4P29622 427 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 RABIFP47224 123 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ADKP55263 362 aaKnown RBP15.48■□□□□ 0.07
NUP50-204ENST00000417702 NSUN2Q08J23 767 aaKnown RBP eCLIP15.48■□□□□ 0.07
NUP50-204ENST00000417702 ELP6Q0PNE2 266 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ASTE1Q2TB18 679 aaPredicted RBP15.48■□□□□ 0.07
NUP50-204ENST00000417702 CCDC157Q569K6 752 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ERAP2Q6P179 960 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 BRAT1Q6PJG6 821 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 UNQ6494/PRO21346Q6UXR6 183 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 CNGA4Q8IV77 575 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 BBS5Q8N3I7 341 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 EID2Q8N6I1 236 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 DENND6BQ8NEG7 585 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 NSMCE1Q8WV22 266 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 CNDP2Q96KP4 475 aaKnown RBP15.48■□□□□ 0.07
NUP50-204ENST00000417702 BMFQ96LC9 184 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ETNK2Q9NVF9 386 aa15.48■□□□□ 0.07
NUP50-204ENST00000417702 ARID1BQ8NFD5 2236 aaPredicted RBP15.47■□□□□ 0.07
NUP50-204ENST00000417702 TSPAN11A1L157 253 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 POM121BA6NF01 834 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 SPINT1O43278 529 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 BUB1BO60566 1050 aaPredicted RBP15.47■□□□□ 0.07
NUP50-204ENST00000417702 MMP20O60882 483 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 SDC3O75056 442 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 TMEM253P0C7T8 217 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 GJC1P36383 396 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 HSPA9P38646 679 aaKnown RBP15.47■□□□□ 0.07
NUP50-204ENST00000417702 RGRP47804 291 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 BCL2L1Q07817 233 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 ZNF235Q14590 738 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 LBRQ14739 615 aaKnown RBP15.47■□□□□ 0.07
NUP50-204ENST00000417702 ST3GAL2Q16842 350 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 UGP2Q16851 508 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 CAMK1DQ8IU85 385 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 TP53INP2Q8IXH6 220 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 ATPAF2Q8N5M1 289 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 IFT43Q96FT9 208 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 PSKH2Q96QS6 385 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 KLF6Q99612 283 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms