RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 KLC4Q9NSK0 619 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 RIC8BQ9NVN3 520 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CRIM1Q9NZV1 1036 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SH3BP4Q9P0V3 963 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MBD2Q9UBB5 411 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NCDNQ9UBB6 729 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 DKK4Q9UBT3 224 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 DDX25Q9UHL0 483 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 VAV3Q9UKW4 847 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CNOT11Q9UKZ1 510 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GABRQQ9UN88 632 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 DRG1Q9Y295 367 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MAB21L2Q9Y586 359 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 LIPGQ9Y5X9 500 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PMF1-BGLAPU3KQ54 211 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 AATKQ6ZMQ8 1374 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 COL17A1Q9UMD9 1497 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MYBBP1AQ9BQG0 1328 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SBNO1A3KN83 1393 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRAV6A0A075B6T7 132 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A087WV48 116 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A0A0MRY4 1105 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TEX13CA0A0J9YWL9 993 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 EDDM13A0A1B0GTR0 161 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TARSL2A2RTX5 802 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 OR2W5A6NFC9 320 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KDM4EB2RXH2 506 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 F8WDY8 70 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 J3QL48 77 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 F2RL2O00254 374 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 NRP1O14786 923 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SYN3O14994 580 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GRM6O15303 877 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TMPRSS2O15393 492 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ZSCAN9O15535 394 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 LRRTM2O43300 516 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KRT86O43790 486 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 HS6ST1O60243 411 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PRDM1O75626 825 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SURF6O75683 361 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 OR6B1O95007 311 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ECDO95905 644 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PRLP01236 227 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 LMNAP02545 664 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 LIPFP07098 398 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GSTM1P09488 218 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GABRB1P18505 474 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 U2AF2P26368 475 aaKnown RBP eCLIP3.18□□□□□ -1.93e-7■□□□□ 8.8
CTDSPL-203ENST00000416688 PTPN4P29074 926 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PCSK1P29120 753 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CDC25BP30305 580 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MC5RP33032 325 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CA8P35219 290 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PTGS2P35354 604 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PTGER3P43115 390 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MAGEA10P43363 369 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 HAAOP46952 286 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MAPKAPK2P49137 400 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 METAP1P53582 386 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PNLIPRP2P54317 469 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MTTPP55157 894 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ADARP55265 1226 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 NOMO3P69849 1222 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM189BP81408 668 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TNFRSF17Q02223 184 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SOX4Q06945 474 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 NFATC3Q12968 1075 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CSTF3Q12996 717 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 OLIG2Q13516 323 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GRAPQ13588 217 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 LPIN1Q14693 890 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GRM4Q14833 912 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KARSQ15046 597 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SGCBQ16585 318 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ZSCAN23Q3MJ62 389 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 LEXMQ3ZCV2 418 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FBXO43Q4G163 708 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GLE1Q53GS7 698 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FSCBQ5H9T9 825 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MFSD14BQ5SR56 506 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 DAB2IPQ5VWQ8 1189 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KRT79Q5XKE5 535 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KRT39Q6A163 491 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC9A4Q6AI14 798 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 JADE1Q6IE81 842 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 UNQ6494/PRO21346Q6UXR6 183 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 RIPOR1Q6ZS17 1223 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 C11orf57Q6ZUT1 292 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CAMKMTQ7Z624 323 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRABD2AQ86V40 505 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 AMZ2Q86W34 360 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM129CQ86XR2 697 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CILP2Q8IUL8 1156 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRIM48Q8IWZ4 208 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP4X1Q8N118 509 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 RNF10Q8N5U6 811 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PTGR2Q8N8N7 351 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CCDC63Q8NA47 563 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 UXS1Q8NBZ7 420 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 DAGLBQ8NCG7 672 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms